RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 C2CD4AQ8NCU7 369 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-232ENST00000557487 MARK4Q96L34 752 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 PGLYRP2Q96PD5 576 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 TCF12Q99081 682 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 ADAMTS10Q9H324 1103 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 PLGRKTQ9HBL7 147 aa16.43■□□□□ 0.22
SHMT2-232ENST00000557487 SMIM28A0A1B0GU29 152 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 AQP12BA6NM10 295 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 H3BRB1 525 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 MRASO14807 208 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 SPTLC1O15269 473 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 CA12O43570 354 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 NRP2O60462 931 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 JCHAINP01591 159 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 MYL3P08590 195 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 CCNCP24863 283 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 CYP2C18P33260 490 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 AVPR1AP37288 418 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 ARCN1P48444 511 aaKnown RBP16.42■□□□□ 0.22
SHMT2-232ENST00000557487 DAOAP59103 153 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 MAP7D1Q3KQU3 841 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 AGKQ53H12 422 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 ZBTB49Q6ZSB9 765 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 ERMP1Q7Z2K6 904 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 DHFR2Q86XF0 187 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 AQP12AQ8IXF9 295 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 PCDH20Q8N6Y1 951 aaKnown RBP16.42■□□□□ 0.22
SHMT2-232ENST00000557487 OR2T34Q8NGX1 318 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 OR2T3Q8NH03 318 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 ZSCAN18Q8TBC5 510 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-232ENST00000557487 SLCO4A1Q96BD0 722 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 TSPAN17Q96FV3 270 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 APOL2Q9BQE5 337 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 CXCL16Q9H2A7 254 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 TUT1Q9H6E5 874 aaKnown RBP16.42■□□□□ 0.22
SHMT2-232ENST00000557487 CAAP1Q9H8G2 361 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 RBPJLQ9UBG7 517 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 SNX13Q9Y5W8 968 aa16.42■□□□□ 0.22
SHMT2-232ENST00000557487 PRORSD1PA6NEY8 169 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 FBP2O00757 339 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 IPO13O94829 963 aaKnown RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 HTR7P34969 479 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 GEMP55040 296 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 NHSL2Q5HYW2 709 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 MARCH8Q5T0T0 291 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 CLEC20AQ6ZU45 233 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 CAMK1DQ8IU85 385 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 COLGALT2Q8IYK4 626 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 CALML6Q8TD86 181 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 NDRG1Q92597 394 aaKnown RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 TFAP2CQ92754 450 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 ELMO2Q96JJ3 720 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 MS4A4AQ96JQ5 239 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 HOPXQ9BPY8 73 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 EIF2AQ9BY44 585 aaKnown RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 ENTPD7Q9NQZ7 604 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 SAGE1Q9NXZ1 904 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 CNOT6Q9ULM6 557 aaKnown RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 MTF2Q9Y483 593 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 TCAF1Q9Y4C2 921 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 ZNF236Q9UL36 1845 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 PDCD11Q14690 1871 aaKnown RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 CLASP2O75122 1294 aaKnown RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 FYNP06241 537 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 SLC26A3P40879 764 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 STX1BP61266 288 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 ZBED5Q49AG3 693 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 MTX3Q5HYI7 312 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 TECRLQ5HYJ1 363 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 PM20D1Q6GTS8 502 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 RWDD4Q6NW29 188 aaKnown RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 TAPT1Q6NXT6 567 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 CNSTQ6PJW8 725 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 PAOXQ6QHF9 649 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 GPR141Q7Z602 305 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 GALNT7Q86SF2 657 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 CEP97Q8IW35 865 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 BBS5Q8N3I7 341 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 FIBCD1Q8N539 461 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 FAM156AQ8NDB6 213 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 FNDC8Q8TC99 324 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 HEXDCQ8WVB3 486 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 OTUD5Q96G74 571 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 RANBP9Q96S59 729 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 BEGAINQ9BUH8 593 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 COLEC11Q9BWP8 271 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 MAGED2Q9UNF1 606 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-232ENST00000557487 KCNH4Q9UQ05 1017 aa16.41■□□□□ 0.22
SHMT2-232ENST00000557487 CEP350Q5VT06 3117 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 MYOCOSA0A1B0GUC4 107 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 TRIM64A6NGJ6 449 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 GOLGA8TH3BQL2 631 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 CXCR3P49682 368 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 CLCN5P51795 746 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 ATXN3P54252 364 aaPredicted RBP16.4■□□□□ 0.22
SHMT2-232ENST00000557487 NME5P56597 212 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 TAS2R39P59534 338 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 BNIP2Q12982 314 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 INPP5AQ14642 412 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms