RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 L7N2F9 121 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF185O15231 689 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 KCNA6P17658 529 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 TAS2R41P59536 307 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 VAMP2P63027 116 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 C1QBPQ07021 282 aaKnown RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 SMTNL2Q2TAL5 461 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 GLRA4Q5JXX5 417 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 JAZF1Q86VZ6 243 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ELMO1Q92556 727 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 TMEM169Q96HH4 297 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 KCNS3Q9BQ31 491 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 UXTQ9UBK9 157 aaPredicted RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 PAPSS2O95340 614 aaPredicted RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 AVPR1AP37288 418 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 GOLGA7BQ2TAP0 167 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 PITRM1Q5JRX3 1037 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 USP43Q70EL4 1123 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 THAP5Q7Z6K1 395 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 VPS28Q9UK41 221 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF335Q9H4Z2 1342 aaPredicted RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 OR10H3O60404 316 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 GRIA3P42263 894 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 MRPS22P82650 360 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF709Q8N972 641 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 ANKRA2Q9H9E1 313 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 ATP7AQ04656 1500 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 FGF10O15520 208 aaPredicted RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 CCNT2O60583 730 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 IFNA4P05014 189 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 YES1P07947 543 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 CCR1P32246 355 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 RAB5BP61020 215 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 PCID2Q5JVF3 399 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 PRICKLE1Q96MT3 831 aaPredicted RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 TLR8Q9NR97 1041 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 CST1P01037 141 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 NRF1Q16656 503 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 RNF43Q68DV7 783 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 OR5J2Q8NH18 312 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 CATP04040 527 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 EEPD1Q7L9B9 569 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 CEP76Q8TAP6 659 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 EPS8L3Q8TE67 593 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 MSANTD3Q96H12 275 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 HPF1Q9NWY4 346 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 TRNAU1APQ9NX07 287 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 ARL5AQ9Y689 179 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 CYP11B1P15538 503 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 EMC2Q15006 297 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 FBXO43Q4G163 708 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 N4BP2L1Q5TBK1 243 aaPredicted RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 MARC1Q5VT66 337 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 RNF19BQ6ZMZ0 732 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 THAP6Q8TBB0 222 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 STRBPQ96SI9 672 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 PI4K2AQ9BTU6 479 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 SLC22A4Q9H015 551 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 IPO13O94829 963 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 OTCP00480 354 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 IFNA10P01566 189 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 FESP07332 822 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 MAPK3P27361 379 aaPredicted RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 HSDL1Q3SXM5 330 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 KATNAL2Q8IYT4 538 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 SHCBP1LQ9BZQ2 653 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 OSGEPL1Q9H4B0 414 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 NR2E1Q9Y466 385 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 PRAMEF33A0A0G2JMD5 474 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 PRAMEF10O60809 474 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 TNFRSF8P28908 595 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 CYP2C18P33260 490 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 NAMPTP43490 491 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 NEDD4P46934 1319 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 OVGP1Q12889 678 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 MFSD10Q14728 455 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 SLC5A9Q2M3M2 681 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 ATP10AO60312 1499 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 CPSF1Q10570 1443 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 SLC22A1O15245 554 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 PTCHD4Q6ZW05 846 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 GALNT7Q86SF2 657 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 STOML3Q8TAV4 291 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 FOXN3O00409 490 aaPredicted RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 SREBF2Q12772 1141 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 CBLBQ13191 982 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 PERM1Q5SV97 790 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 ARMC10Q8N2F6 343 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 GMCL1Q96IK5 515 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 COLEC11Q9BWP8 271 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 AP5Z1O43299 807 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 RHOAP61586 193 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 ATP13A4Q4VNC1 1196 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 SPERTQ8NA61 448 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 RNF31Q96EP0 1072 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 SERPINB11Q96P15 392 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 PCDHB16Q9NRJ7 776 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 PTTG2Q9NZH5 202 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 OR10H1Q9Y4A9 318 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 ANXA2P2A6NMY6 339 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms