RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 BCKDHBP21953 392 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 ACSL1P33121 698 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 VPS41P49754 854 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 TERF1P54274 439 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 WNT3AP56704 352 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 CKAP4Q07065 602 aaKnown RBP12.92□□□□□ -0.34
SHMT2-227ENST00000557269 ARMC12Q5T9G4 340 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 KCTD11Q693B1 232 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 USP30Q70CQ3 517 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 WDR5BQ86VZ2 330 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 IPMKQ8NFU5 416 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 PIH1D2Q8WWB5 315 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 SLCO2A1Q92959 643 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 PCDH9Q9HC56 1237 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 RAB6BQ9NRW1 208 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 HAUS2Q9NVX0 235 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 PAK5Q9P286 719 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 FAM153AQ9UHL3 310 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 GGT7Q9UJ14 662 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 ITM2BQ9Y287 266 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 ANKRD36A6QL64 1941 aa12.92□□□□□ -0.34
SHMT2-227ENST00000557269 EML5Q05BV3 1969 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 CCDC163A0A0D9SF12 145 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 LOC285095A0A1B0GVY8 99 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 TTI1O43156 1089 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 HRO43593 1189 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 USP12O75317 370 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 ECEL1O95672 775 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 ATXN1LP0C7T5 689 aaKnown RBP12.91□□□□□ -0.34
SHMT2-227ENST00000557269 CTPS1P17812 591 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 ADRA1AP35348 466 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 CHRNA4P43681 627 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 NEK3P51956 506 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 DR1Q01658 176 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 LMNB2Q03252 620 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 GPS1Q13098 491 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 MPP3Q13368 585 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 TUBB2AQ13885 445 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 GALNT3Q14435 633 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 SLC14A2Q15849 920 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 UGP2Q16851 508 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 ZNF528Q3MIS6 628 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 TTC31Q49AM3 519 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-227ENST00000557269 FBXL19Q6PCT2 694 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 TTC7BQ86TV6 843 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 LONP2Q86WA8 852 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 JAMLQ86YT9 394 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 PDCD7Q8N8D1 485 aaKnown RBP12.91□□□□□ -0.34
SHMT2-227ENST00000557269 LRRN4CLQ8ND94 238 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 LPCAT1Q8NF37 534 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 PRSS33Q8NF86 280 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 HCAR2Q8TDS4 363 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 TOE1Q96GM8 510 aaKnown RBP12.91□□□□□ -0.34
SHMT2-227ENST00000557269 PPP1R16AQ96I34 528 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 APOL2Q9BQE5 337 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 TRIM51Q9BSJ1 452 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 TUBB2BQ9BVA1 445 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 FICDQ9BVA6 458 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 PCDH12Q9NPG4 1184 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 DYRK4Q9NR20 520 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 WSB2Q9NYS7 404 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-227ENST00000557269 SCML1Q9UN30 329 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 FADS3Q9Y5Q0 445 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 ZNF318Q5VUA4 2279 aa12.91□□□□□ -0.34
SHMT2-227ENST00000557269 CUL9Q8IWT3 2517 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 TCRBV7S3A2A0A539 114 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 A8MX80 341 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 UPK3BL1B0FP48 263 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 UPK3BL2E5RIL1 263 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 H0Y858 1186 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 AREL1O15033 823 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 RAD51CO43502 376 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 ZNF217O75362 1048 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 ANXA9O76027 345 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 CPP00450 1065 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 ALPIP09923 528 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 GRIA1P42261 906 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 NUBP1P53384 320 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 ADPRHP54922 357 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 GEMP55040 296 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 CDK18Q07002 472 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 TCF15Q12870 199 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 SEMA5AQ13591 1074 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 PTK6Q13882 451 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 PRPSAP1Q14558 356 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 QPCTQ16769 361 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 SIRPB2Q5JXA9 342 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 DNTTIP2Q5QJE6 756 aaKnown RBP12.9□□□□□ -0.34
SHMT2-227ENST00000557269 CFAP58Q5T655 872 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 BRAT1Q6PJG6 821 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 SLC25A41Q8N5S1 370 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 DEFB119Q8N690 84 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 NOA1Q8NC60 698 aaKnown RBP12.9□□□□□ -0.34
SHMT2-227ENST00000557269 OR14C36Q8NHC7 312 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 GRK7Q8WTQ7 553 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 FEM1CQ96JP0 617 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 CARD6Q9BX69 1037 aa12.9□□□□□ -0.34
SHMT2-227ENST00000557269 L2HGDHQ9H9P8 463 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms