RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 PMS2CLQ68D20 193 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 TIGD7Q6NT04 549 aaPredicted RBP9.08□□□□□ -0.96
CHD8-210ENST00000555962 LIAT1Q6ZQX7 453 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 PRR23BQ6ZRT6 265 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 USP30Q70CQ3 517 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 SRLQ86TD4 932 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 ZC3H18Q86VM9 953 aaKnown RBP9.08□□□□□ -0.96
CHD8-210ENST00000555962 SLC41A1Q8IVJ1 513 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 TMEFF1Q8IYR6 380 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 SLC35F6Q8N357 371 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 HDDC3Q8N4P3 179 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 DEFB119Q8N690 84 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 CCNYQ8ND76 341 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 ACTL9Q8TC94 416 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 GANCQ8TET4 914 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 P3H4Q92791 437 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 FATE1Q969F0 183 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 ZC3H10Q96K80 434 aaKnown RBP9.08□□□□□ -0.96
CHD8-210ENST00000555962 SPACA7Q96KW9 195 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 KLHL32Q96NJ5 620 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 IL12RB2Q99665 862 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 FAM118BQ9BPY3 351 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 GPR174Q9BXC1 333 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 CEP41Q9BYV8 373 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 C10orf88Q9H8K7 445 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 NT5MQ9NPB1 228 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 SCML1Q9UN30 329 aa9.08□□□□□ -0.96
CHD8-210ENST00000555962 SMG5Q9UPR3 1016 aaKnown RBP9.08□□□□□ -0.96
CHD8-210ENST00000555962 MYLKQ15746 1914 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 SCN8AQ9UQD0 1980 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 C16orf96A6NNT2 1141 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 C10orf142B7Z368 130 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 KCNK3O14649 394 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 PPP1R12AO14974 1030 aaPredicted RBP9.07□□□□□ -0.96
CHD8-210ENST00000555962 JCHAINP01591 159 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 HLA-DQB2P05538 268 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 CCNB1P14635 433 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 ITGB7P26010 798 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 OXTRP30559 389 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 CETN2P41208 172 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 PTGER3P43115 390 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 NR2C2P49116 596 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 SCNN1BP51168 640 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 TAS2R38P59533 333 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 IFI35P80217 286 aaPredicted RBP9.07□□□□□ -0.96
CHD8-210ENST00000555962 RPL6Q02878 288 aaKnown RBP9.07□□□□□ -0.96
CHD8-210ENST00000555962 ZNF33AQ06730 810 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 NSUN2Q08J23 767 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD8-210ENST00000555962 COX20Q5RI15 118 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 FAM46CQ5VWP2 391 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 ALKBH2Q6NS38 261 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 NCEH1Q6PIU2 408 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 GDPD4Q6W3E5 623 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.07□□□□□ -0.96
CHD8-210ENST00000555962 PARS2Q7L3T8 475 aaKnown RBP9.07□□□□□ -0.96
CHD8-210ENST00000555962 ARMCX6Q7L4S7 300 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 ZSWIM9Q86XI8 627 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 CAMK1DQ8IU85 385 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 C17orf53Q8N3J3 647 aaPredicted RBP9.07□□□□□ -0.96
CHD8-210ENST00000555962 CNTD1Q8N815 330 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 ARRDC2Q8TBH0 407 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 NSMCE1Q8WV22 266 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 UBE2Q2Q8WVN8 375 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 LRIG1Q96JA1 1093 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 QKIQ96PU8 341 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD8-210ENST00000555962 OMDQ99983 421 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 MGME1Q9BQP7 344 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 CPEB1Q9BZB8 566 aaKnown RBP9.07□□□□□ -0.96
CHD8-210ENST00000555962 BTBD1Q9H0C5 482 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 CARD9Q9H257 536 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 C6orf106Q9H6K1 298 aaPredicted RBP9.07□□□□□ -0.96
CHD8-210ENST00000555962 NOD2Q9HC29 1040 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 RBM22Q9NW64 420 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD8-210ENST00000555962 FZD4Q9ULV1 537 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 NCKAP1Q9Y2A7 1128 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 R3HDM2Q9Y2K5 976 aaKnown RBP9.07□□□□□ -0.96
CHD8-210ENST00000555962 TDRD6O60522 2096 aaKnown RBP9.07□□□□□ -0.96
CHD8-210ENST00000555962 CABIN1Q9Y6J0 2220 aa9.07□□□□□ -0.96
CHD8-210ENST00000555962 CEP250Q9BV73 2442 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 PCDH15Q96QU1 1955 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 PRR23AA6NEV1 266 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 CDK2AP1O14519 115 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 SPINT1O43278 529 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 PLRG1O43660 514 aaKnown RBP9.06□□□□□ -0.96
CHD8-210ENST00000555962 NDUFS2O75306 463 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 TJP3O95049 919 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 SEMA4FO95754 770 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 IL2RAP01589 272 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 ATP1A1P05023 1023 aaKnown RBP9.06□□□□□ -0.96
CHD8-210ENST00000555962 ITIH2P19823 946 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 PTPN3P26045 913 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 CXCR5P32302 372 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 HSPA9P38646 679 aaKnown RBP9.06□□□□□ -0.96
CHD8-210ENST00000555962 EIF1AXP47813 144 aaKnown RBP9.06□□□□□ -0.96
CHD8-210ENST00000555962 DHPSP49366 369 aaPredicted RBP9.06□□□□□ -0.96
CHD8-210ENST00000555962 RENBPP51606 427 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 ADPRHP54922 357 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 AP1S1P61966 158 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 DSC2Q02487 901 aa9.06□□□□□ -0.96
CHD8-210ENST00000555962 RAD51Q06609 339 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms