RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 ZUFSPQ96AP4 578 aa16.14■□□□□ 0.17
MARK3-209ENST00000555235 C18orf25Q96B23 403 aaPredicted RBP16.14■□□□□ 0.17
MARK3-209ENST00000555235 SNX27Q96L92 541 aa16.14■□□□□ 0.17
MARK3-209ENST00000555235 TUBA1CQ9BQE3 449 aa16.14■□□□□ 0.17
MARK3-209ENST00000555235 SNTG2Q9NY99 539 aa16.14■□□□□ 0.17
MARK3-209ENST00000555235 GTSE1Q9NYZ3 720 aa16.14■□□□□ 0.17
MARK3-209ENST00000555235 DOLKQ9UPQ8 538 aa16.14■□□□□ 0.17
MARK3-209ENST00000555235 DYTNA2CJ06 578 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 K7EPI3 171 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 DLGAP1O14490 977 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 FOXD2O60548 495 aaPredicted RBP16.13■□□□□ 0.17
MARK3-209ENST00000555235 EPHX2P34913 555 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 POLD2P49005 469 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 KPNA2P52292 529 aaKnown RBP16.13■□□□□ 0.17
MARK3-209ENST00000555235 KCNC4Q03721 635 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 INPP5AQ14642 412 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 KCTD2Q14681 263 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 UGP2Q16851 508 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 DCAF4L1Q3SXM0 396 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 FGD3Q5JSP0 725 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 NANOGP8Q6NSW7 305 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 C8orf82Q6P1X6 216 aaPredicted RBP16.13■□□□□ 0.17
MARK3-209ENST00000555235 ABRAXAS1Q6UWZ7 409 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 TP53INP2Q8IXH6 220 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 MRPL46Q9H2W6 279 aaKnown RBP16.13■□□□□ 0.17
MARK3-209ENST00000555235 MEAF6Q9HAF1 191 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 MRM3Q9HC36 420 aaKnown RBP16.13■□□□□ 0.17
MARK3-209ENST00000555235 GID8Q9NWU2 228 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 SLC30A1Q9Y6M5 507 aa16.13■□□□□ 0.17
MARK3-209ENST00000555235 AQP12BA6NM10 295 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 NRP2O60462 931 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 CDH3P22223 829 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 LMO2P25791 158 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 PTPN3P26045 913 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 DNAJB13P59910 316 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 PITX1P78337 314 aaPredicted RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 TBCELQ5QJ74 424 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 GJC2Q5T442 439 aaPredicted RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 C9orf57Q5W0N0 161 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 BNIPLQ7Z465 357 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 AQP12AQ8IXF9 295 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 ANKRD13AQ8IZ07 590 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 GOLM1Q8NBJ4 401 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 BEST2Q8NFU1 509 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 TRUB1Q8WWH5 349 aaKnown RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 NDRG1Q92597 394 aaKnown RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 ROPN1LQ96C74 230 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 POLR1BQ9H9Y6 1135 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 RBPJLQ9UBG7 517 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 MCM3APO60318 1980 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 COL1A2P08123 1366 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 A0A0G2JLL6 359 aaPredicted RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 KCNK1O00180 336 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 AP3B1O00203 1094 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 E2F6O75461 281 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 GPC4O75487 556 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 DAB1O75553 588 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 FUCA1P04066 466 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 IL10P22301 178 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 LRPAP1P30533 357 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 GNL1P36915 607 aaPredicted RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 RGS21Q2M5E4 152 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 CERCAMQ5T4B2 595 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 KCTD11Q693B1 232 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 XKR5Q6UX68 686 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 PRRT2Q7Z6L0 340 aaPredicted RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 PNPT1Q8TCS8 783 aaKnown RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 SLC2A14Q8TDB8 520 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 NT5C3BQ969T7 300 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 SLC45A3Q96JT2 553 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 NEURL2Q9BR09 285 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 TDRD1Q9BXT4 1180 aaKnown RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 YTHDF1Q9BYJ9 559 aaKnown RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 EML4Q9HC35 981 aaKnown RBP16.12■□□□□ 0.17
MARK3-209ENST00000555235 CHRAC1Q9NRG0 131 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 AGPAT4Q9NRZ5 378 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 SETD4Q9NVD3 440 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 GJD2Q9UKL4 321 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 B3GNT3Q9Y2A9 372 aa16.12■□□□□ 0.17
MARK3-209ENST00000555235 RNF103-CHMP3A0A140T963 221 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 IQCA1LA6NCM1 817 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 TMEM247A6NEH6 219 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 TMX2-CTNND1H3BSU7 103 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 DCLK1O15075 740 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 SULT1C4O75897 302 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 SEC24DO94855 1032 aaPredicted RBP16.11■□□□□ 0.17
MARK3-209ENST00000555235 FASP25445 335 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 AVPR1AP37288 418 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 SLC7A2P52569 658 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 RAB10P61026 200 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 GRSF1Q12849 480 aaKnown RBP eCLIP16.11■□□□□ 0.17
MARK3-209ENST00000555235 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 TSTD2Q5T7W7 516 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 OGFOD2Q6N063 350 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 ANKRD26P1Q6NSI1 321 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 TMEM26Q6ZUK4 368 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 PDZD4Q76G19 769 aaPredicted RBP16.11■□□□□ 0.17
MARK3-209ENST00000555235 EPHX4Q8IUS5 362 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 PCYOX1LQ8NBM8 494 aa16.11■□□□□ 0.17
MARK3-209ENST00000555235 MRPL57Q9BQC6 102 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms