RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 RINT1Q6NUQ1 792 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 RHBDF2Q6PJF5 856 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 IL27RAQ6UWB1 636 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 Q6ZVL8 140 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 C1orf186Q6ZWK4 172 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 SPRED1Q7Z699 444 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 DIS3L2Q8IYB7 885 aaKnown RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 UNC5BQ8IZJ1 945 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 ZNF843Q8N446 348 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 TMEM161BQ8NDZ6 487 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 SNX33Q8WV41 574 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 GFM2Q969S9 779 aaKnown RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 ACBD6Q9BR61 282 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 PYM1Q9BRP8 204 aaKnown RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 CCSER1Q9C0I3 900 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 PRORYQ9H606 182 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 ASB7Q9H672 318 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 DDX19AQ9NUU7 478 aaKnown RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 LRWD1Q9UFC0 647 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 PCNX2A6NKB5 2137 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 TICRRQ7Z2Z1 1910 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 IGHV1OR15-9A0A0B4J2B8 117 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 A0A1B0GTW7 788 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 CYSRT1A8MQ03 144 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 KPNA7A9QM74 516 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 E9PMD0 336 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 LEFTY2O00292 366 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 OGTO15294 1046 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 DAPK3O43293 454 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 CDC14BO60729 498 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 PRAMEF4O60810 478 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 ATXN1LP0C7T5 689 aaKnown RBP5.14□□□□□ -1.59
ATXN3-228ENST00000554592 GABRG2P18507 467 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 SCP2P22307 547 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 CYP2F1P24903 491 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 CDC25AP30304 524 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 ADSLP30566 484 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-228ENST00000554592 TNFSF9P41273 254 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 PPP3CCP48454 512 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 LIG4P49917 911 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 MEOX1P50221 254 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 SESN2P58004 480 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-228ENST00000554592 ADAM8P78325 824 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 SLC7A9P82251 487 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 ATP2C1P98194 919 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-228ENST00000554592 POU5F1Q01860 360 aaKnown RBP5.14□□□□□ -1.59
ATXN3-228ENST00000554592 CFHR1Q03591 330 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 GAD2Q05329 585 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 GRIK2Q13002 908 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 RESTQ13127 1097 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 MAPK7Q13164 816 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 TRIM29Q14134 588 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 HLTFQ14527 1009 aaKnown RBP eCLIP5.14□□□□□ -1.59
ATXN3-228ENST00000554592 TMEM132DQ14C87 1099 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 SAFBQ15424 915 aaKnown RBP eCLIP5.14□□□□□ -1.59
ATXN3-228ENST00000554592 PGS1Q32NB8 556 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 C19orf54Q5BKX5 351 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 KRT79Q5XKE5 535 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 JADE1Q6IE81 842 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 ZBTB34Q8NCN2 500 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 PPP1R35Q8TAP8 253 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 DNASE2BQ8WZ79 361 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 KAT5Q92993 513 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 HDAC10Q969S8 669 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 BICD1Q96G01 975 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 CDK5RAP1Q96SZ6 601 aaKnown RBP5.14□□□□□ -1.59
ATXN3-228ENST00000554592 RAB34Q9BZG1 259 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 DEF6Q9H4E7 631 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 PRDM16Q9HAZ2 1276 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 ARNT2Q9HBZ2 717 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 MSL2Q9HCI7 577 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 TMLHEQ9NVH6 421 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 DPP3Q9NY33 737 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 TRPM5Q9NZQ8 1165 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 CALCOCO1Q9P1Z2 691 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 TBC1D14Q9P2M4 693 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 CPSF3Q9UKF6 684 aaKnown RBP5.14□□□□□ -1.59
ATXN3-228ENST00000554592 C2CD2Q9Y426 696 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 NFE2L3Q9Y4A8 694 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 PCDHGB2Q9Y5G2 931 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 PCDHA13Q9Y5I0 950 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 VWA8A3KMH1 1905 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 CACNA1EQ15878 2313 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 DMXL2Q8TDJ6 3036 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 ABCA7Q8IZY2 2146 aa5.14□□□□□ -1.59
ATXN3-228ENST00000554592 A0A0B4J269 797 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 A0A1W2PQF6 199 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 ZNF840PA6NDX5 716 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 A6NNZ2 444 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 FLRT2O43155 660 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 RRP8O43159 456 aaKnown RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 TNFSF14O43557 240 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 FAM189A1O60320 539 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 HUS1O60921 280 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 DTNBO60941 627 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 CER1O95813 267 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 KRT18P05783 430 aaKnown RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 HLA-EP13747 358 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 HOXB2P14652 356 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 ITPKBP27987 946 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms