RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 KLK8O60259 260 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 GJB3O75712 270 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 SEC14L2O76054 403 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 ACADMP11310 421 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 CD38P28907 300 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 AVPR1AP37288 418 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 PIP4K2AP48426 406 aaPredicted RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 HDAC4P56524 1084 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 ARF3P61204 181 aaPredicted RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 SSBP2P81877 361 aaPredicted RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 ARF1P84077 181 aaKnown RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 MAMLD1Q13495 774 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 FGFBP1Q14512 234 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 TRIP6Q15654 476 aaKnown RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 MEA1Q16626 185 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 GSTA3Q16772 222 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 HEPHL1Q6MZM0 1159 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 FASTKD5Q7L8L6 764 aaKnown RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 CTU1Q7Z7A3 348 aaKnown RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 FAM185AQ8N0U4 392 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 TTC39CQ8N584 583 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 MCPH1Q8NEM0 835 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 C16orf52Q8NHV5 167 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 PSPC1Q8WXF1 523 aaKnown RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 GTF3C6Q969F1 213 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 RNF183Q96D59 192 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 ZC3HAV1LQ96H79 300 aaKnown RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 NEUROD6Q96NK8 337 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 SIN3AQ96ST3 1273 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 PLEKHA4Q9H4M7 779 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 KIF9Q9HAQ2 790 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 SLC6A13Q9NSD5 602 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 RNF146Q9NTX7 359 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 SPATS2LQ9NUQ6 558 aaKnown RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 SLCO3A1Q9UIG8 710 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 FBXO2Q9UK22 296 aaPredicted RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 GPR34Q9UPC5 381 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 BTBD3Q9Y2F9 522 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 FAM96BQ9Y3D0 163 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 SLC4A4Q9Y6R1 1079 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 PTPRMP28827 1452 aa5.37□□□□□ -1.55
CHD8-207ENST00000554384 PCF11O94913 1555 aaKnown RBP5.37□□□□□ -1.55
CHD8-207ENST00000554384 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.36□□□□□ -1.55
CHD8-207ENST00000554384 ANKRD18BA2A2Z9 1011 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 LRRC53A6NM62 1247 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 I6L893 689 aaPredicted RBP5.36□□□□□ -1.55
CHD8-207ENST00000554384 BCAT2O15382 392 aaPredicted RBP5.36□□□□□ -1.55
CHD8-207ENST00000554384 RGS11O94810 467 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 EPN2O95208 641 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 TFP02787 698 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 FGF2P09038 288 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 TFPIP10646 304 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 IL7RP16871 459 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 PTPN2P17706 415 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 CHRNB2P17787 502 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 BSGP35613 385 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 ARL3P36405 182 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 THPOP40225 353 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 CDH12P55289 794 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 LPIN1Q14693 890 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 EZH2Q15910 746 aaKnown RBP5.36□□□□□ -1.55
CHD8-207ENST00000554384 ETFDHQ16134 617 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 SOWAHAQ2M3V2 549 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 ESCO2Q56NI9 601 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 ZKSCAN2Q63HK3 967 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 CPLX2Q6PUV4 134 aaKnown RBP5.36□□□□□ -1.55
CHD8-207ENST00000554384 TSSK4Q6SA08 328 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 KLHL24Q6TFL4 600 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 CLEC17AQ6ZS10 378 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 HAPLN4Q86UW8 402 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 TMC8Q8IU68 726 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 FRMD1Q8N878 549 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 ZMIZ2Q8NF64 920 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 TMEM18Q96B42 140 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 ZFYVE19Q96K21 471 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 MSTO1Q9BUK6 570 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 HAUS2Q9NVX0 235 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 PLK2Q9NYY3 685 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 NCKIPSDQ9NZQ3 722 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 ZNF70Q9UC06 446 aaPredicted RBP5.36□□□□□ -1.55
CHD8-207ENST00000554384 CNOT8Q9UFF9 292 aaKnown RBP5.36□□□□□ -1.55
CHD8-207ENST00000554384 NDRG3Q9UGV2 375 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 SWAP70Q9UH65 585 aa5.36□□□□□ -1.55
CHD8-207ENST00000554384 SETD1BQ9UPS6 1966 aaKnown RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 GRIN2AQ12879 1464 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 FGD5Q6ZNL6 1462 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 LIPT2A6NK58 231 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 HMGB1P1B2RPK0 211 aaPredicted RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 BTBD18B2RXH4 712 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 EIF3CLB5ME19 914 aaKnown RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 SEC14L5O43304 696 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 EIF2S1P05198 315 aaKnown RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 ZNF8P17098 575 aaPredicted RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 TNFRSF1BP20333 461 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 PSMA4P25789 261 aaKnown RBP5.35□□□□□ -1.55
CHD8-207ENST00000554384 DCTDP32321 178 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 SHMT1P34896 483 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 HOXD13P35453 343 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 MMP13P45452 471 aa5.35□□□□□ -1.55
CHD8-207ENST00000554384 GPR12P47775 334 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms