RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PRUNE1Q86TP1 453 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 TP53INP2Q8IXH6 220 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 BBS5Q8N3I7 341 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 CARNMT1Q8N4J0 409 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 NETO2Q8NC67 525 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 FBXO25Q8TCJ0 367 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 ARHGEF2Q92974 986 aaKnown RBP14.68□□□□□ -0.06
SHMT2-208ENST00000553868 EXOC4Q96A65 974 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 ZNF599Q96NL3 588 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 CLMPQ9H6B4 373 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 CAPN10Q9HC96 672 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 ZDHHC18Q9NUE0 388 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 GOLGA6AQ9NYA3 693 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 COL12A1Q99715 3063 aa14.68□□□□□ -0.06
SHMT2-208ENST00000553868 HELZP42694 1942 aaKnown RBP14.68□□□□□ -0.06
SHMT2-208ENST00000553868 PTPRQQ9UMZ3 2332 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 ATMQ13315 3056 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 PTPN13Q12923 2485 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 CEP192Q8TEP8 1941 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 SCAMP3O14828 347 aaKnown RBP14.67□□□□□ -0.06
SHMT2-208ENST00000553868 PSMD3O43242 534 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 MYBL2P10244 700 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 P2RY2P41231 377 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 IFNAR2P48551 515 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 SGSHP51688 502 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 SARNPP82979 210 aaKnown RBP14.67□□□□□ -0.06
SHMT2-208ENST00000553868 CDK16Q00536 496 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 SLC12A1Q13621 1099 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 SLMAPQ14BN4 828 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 RNASEH2BQ5TBB1 312 aaKnown RBP14.67□□□□□ -0.06
SHMT2-208ENST00000553868 RNF219Q5W0B1 726 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-208ENST00000553868 MFN1Q8IWA4 741 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 GSPT2Q8IYD1 628 aaKnown RBP14.67□□□□□ -0.06
SHMT2-208ENST00000553868 ZNF567Q8N184 647 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 LRRN4Q8WUT4 740 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 MAML1Q92585 1016 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 IL12RB2Q99665 862 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 SPON2Q9BUD6 331 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 MUC3BQ9H195 1237 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 PRORYQ9H606 182 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 KIAA1522Q9P206 1035 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-208ENST00000553868 RSPH14Q9UHP6 348 aa14.67□□□□□ -0.06
SHMT2-208ENST00000553868 MGAQ8IWI9 3026 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 FAM149AA5PLN7 773 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 KDELR3O43731 214 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 PRAMEF11O60813 436 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 JCHAINP01591 159 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 ECHS1P30084 290 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 MAGEA6P43360 314 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 LMAN1P49257 510 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 SEMA5AQ13591 1074 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 RFTN1Q14699 578 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-208ENST00000553868 BEND6Q5SZJ8 279 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-208ENST00000553868 MARC1Q5VT66 337 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 PEAR1Q5VY43 1037 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-208ENST00000553868 RHBDF2Q6PJF5 856 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 PCSK4Q6UW60 755 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 TMEM92Q6UXU6 159 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 TPGS1Q6ZTW0 290 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 TMPRSS7Q7RTY8 843 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 NAXDQ8IW45 347 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 ZCCHC9Q8N567 271 aaKnown RBP14.66□□□□□ -0.06
SHMT2-208ENST00000553868 FIBINQ8TAL6 211 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 CPT1BQ92523 772 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 TEKT5Q96M29 485 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 PHACTR1Q9C0D0 580 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 GBA3Q9H227 469 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 ATP13A1Q9HD20 1204 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 EIF2B3Q9NR50 452 aaKnown RBP14.66□□□□□ -0.06
SHMT2-208ENST00000553868 SPHK2Q9NRA0 654 aa14.66□□□□□ -0.06
SHMT2-208ENST00000553868 FARP1Q9Y4F1 1045 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-208ENST00000553868 ERI2A8K979 691 aaKnown RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 ARHGAP33O14559 1287 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 NFATC1O95644 943 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 ADH1CP00326 375 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 SERPINF2P08697 491 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 TPSB2P20231 275 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 HOXD9P28356 352 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 ACVRL1P37023 503 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 ARL4CP56559 192 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 GEMIN4P57678 1058 aaKnown RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 CFHR1Q03591 330 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 SRSF1Q07955 248 aaKnown RBP eCLIP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 PDGFRLQ15198 375 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 TPSAB1Q15661 275 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 DUOXA1Q1HG43 343 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 CXorf57Q6NSI4 855 aaKnown RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 ARHGAP36Q6ZRI8 547 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 HDXQ7Z353 690 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 NAT8LQ8N9F0 302 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 OR7D4Q8NG98 312 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 USP33Q8TEY7 942 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 OSCP1Q8WVF1 389 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 PRCCQ92733 491 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 AGAP3Q96P47 875 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 C2orf49Q9BVC5 232 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 BBS2Q9BXC9 721 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 ACE2Q9BYF1 805 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 SLC2A11Q9BYW1 496 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 NEUROG2Q9H2A3 272 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms