RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 CD48P09326 243 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 DGKAP23743 735 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 SERPINA4P29622 427 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 IGFALSP35858 605 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 ACADVLP49748 655 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 SLC10A7Q0GE19 358 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 ELP6Q0PNE2 266 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 MMRN1Q13201 1228 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 PDE1CQ14123 709 aaPredicted RBP11.72□□□□□ -0.53
CCNK-202ENST00000553636 FZD2Q14332 565 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 ZNF235Q14590 738 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 RFTN1Q14699 578 aaPredicted RBP11.72□□□□□ -0.53
CCNK-202ENST00000553636 LBRQ14739 615 aaKnown RBP11.72□□□□□ -0.53
CCNK-202ENST00000553636 SLC18A3Q16572 532 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 HADHQ16836 314 aaKnown RBP11.72□□□□□ -0.53
CCNK-202ENST00000553636 UGP2Q16851 508 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
CCNK-202ENST00000553636 TPRG1LQ5T0D9 272 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 TMCO4Q5TGY1 634 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 TMPRSS7Q7RTY8 843 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 ZSWIM9Q86XI8 627 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 SLC25A45Q8N413 288 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 ATPAF2Q8N5M1 289 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 FAM174AQ8TBP5 190 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 ASB12Q8WXK4 309 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 TSC1Q92574 1164 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 ZNF641Q96N77 438 aaPredicted RBP11.72□□□□□ -0.53
CCNK-202ENST00000553636 LENG8Q96PV6 779 aaPredicted RBP11.72□□□□□ -0.53
CCNK-202ENST00000553636 TUBGCP5Q96RT8 1024 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 C1QTNF7Q9BXJ2 289 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 ATP13A3Q9H7F0 1226 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 PCDH12Q9NPG4 1184 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 GPR27Q9NS67 375 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 ABHD10Q9NUJ1 306 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 SEPT3Q9UH03 358 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 ZMIZ1Q9ULJ6 1067 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 CACNA1BQ00975 2339 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 SPTY2D1-AS1A0A0U1RR47 76 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 TTC24A2A3L6 582 aaPredicted RBP11.71□□□□□ -0.53
CCNK-202ENST00000553636 TMEM8BA6NDV4 472 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 TRIM38O00635 465 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 SIGLEC6O43699 453 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 MFAP3LO75121 409 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 RFPL3O75679 317 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 PIAS2O75928 621 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 PROSCO94903 275 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 H2AFZP0C0S5 128 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 SERPINB6P35237 376 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 CSNK1DP48730 415 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 SCNN1BP51168 640 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 SUOXP51687 545 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 THOP1P52888 689 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 ADKP55263 362 aaKnown RBP11.71□□□□□ -0.53
CCNK-202ENST00000553636 CLDN6P56747 220 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 TAS2R40P59535 323 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 PFN3P60673 137 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 BCL2L1Q07817 233 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 IRF4Q15306 451 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 TMEM52BQ4KMG9 183 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 HS1BP3Q53T59 392 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 ERAP2Q6P179 960 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 BRAT1Q6PJG6 821 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 CCNI2Q6ZMN8 369 aaPredicted RBP11.71□□□□□ -0.53
CCNK-202ENST00000553636 H2AFVQ71UI9 128 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 PARGQ86W56 976 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 DCP2Q8IU60 420 aaKnown RBP11.71□□□□□ -0.53
CCNK-202ENST00000553636 GALNT15Q8N3T1 639 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 KDF1Q8NAX2 398 aaPredicted RBP11.71□□□□□ -0.53
CCNK-202ENST00000553636 TP53I13Q8NBR0 393 aaPredicted RBP11.71□□□□□ -0.53
CCNK-202ENST00000553636 HCAR2Q8TDS4 363 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 ZNF599Q96NL3 588 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 PSKH2Q96QS6 385 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 CHP1Q99653 195 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 MBNL1Q9NR56 388 aaKnown RBP11.71□□□□□ -0.53
CCNK-202ENST00000553636 SPTLC3Q9NUV7 552 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 UVRAGQ9P2Y5 699 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 ATP8A1Q9Y2Q0 1164 aa11.71□□□□□ -0.53
CCNK-202ENST00000553636 ARID1BQ8NFD5 2236 aaPredicted RBP11.7□□□□□ -0.54
CCNK-202ENST00000553636 SSU72P8A0A1W2PR75 194 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 H3BM21 787 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
CCNK-202ENST00000553636 MFSD11O43934 449 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 LZTS3O60299 673 aaPredicted RBP11.7□□□□□ -0.54
CCNK-202ENST00000553636 MAFKO60675 156 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 NEBLO76041 1014 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 MAP3K6O95382 1288 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 TMEM253P0C7T8 217 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 C6P13671 934 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 NME1P15531 152 aaKnown RBP11.7□□□□□ -0.54
CCNK-202ENST00000553636 IL4RP24394 825 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 MMP12P39900 470 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 LIG3P49916 1009 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 RENBPP51606 427 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 AP1S1P61966 158 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCNK-202ENST00000553636 DAB2P98082 770 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 DPYSL3Q14195 570 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 ASTE1Q2TB18 679 aaPredicted RBP11.7□□□□□ -0.54
CCNK-202ENST00000553636 PROX2Q3B8N5 592 aa11.7□□□□□ -0.54
CCNK-202ENST00000553636 ATP13A4Q4VNC1 1196 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms