RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	MEI1	Q5TIA1	1274 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	BRAT1	Q6PJG6	821 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	ZSCAN30	Q86W11	494 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	HORMAD1	Q86X24	394 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	KLHDC8B	Q8IXV7	354 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	KIAA2013	Q8IYS2	634 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	CBARP	Q8N350	705 aa	Predicted RBP	10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	RYBP	Q8N488	228 aa	Predicted RBP	10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	CEP76	Q8TAP6	659 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	GANC	Q8TET4	914 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	SLC6A18	Q96N87	628 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	MCCC1	Q96RQ3	725 aa	Predicted RBP	10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	TLR10	Q9BXR5	811 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	FSCN3	Q9NQT6	498 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	SUSD2	Q9UGT4	822 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	AMFR	Q9UKV5	643 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	GUCA1B	Q9UMX6	200 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	SLC6A14	Q9UN76	642 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	DMTF1	Q9Y222	760 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	PPIL1	Q9Y3C6	166 aa		10.21	□□□□□ -0.77
CALCOCO1-222	ENST00000553154	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TCRBV7S2A1N4T	A0A589	114 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RIOK3	O14730	519 aa	Known RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PPP1R12A	O14974	1030 aa	Predicted RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	VILL	O15195	856 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RAD51B	O15315	384 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	BCAT2	O15382	392 aa	Predicted RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TSPAN6	O43657	245 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	GDF9	O60383	454 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PGLS	O95336	258 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PTPN3	P26045	913 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SERPINA4	P29622	427 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CD68	P34810	354 aa	Predicted RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SCNN1B	P51168	640 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RACK1	P63244	317 aa	Known RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SKOR1	P84550	965 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RAD51	Q06609	339 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ZNF211	Q13398	564 aa	Predicted RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	XRCC4	Q13426	336 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	AGER	Q15109	404 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	LRRC73	Q5JTD7	316 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	FAM182A	Q5T1J6	154 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ZFYVE27	Q5T4F4	411 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	KAZN	Q674X7	775 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	NAPEPLD	Q6IQ20	393 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	KIAA1161	Q6NSJ0	714 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	FBXL19	Q6PCT2	694 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	LAYN	Q6UX15	382 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	THADA	Q6YHU6	1953 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	GCNT7	Q6ZNI0	430 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	B4GALNT4	Q76KP1	1039 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RABEPK	Q7Z6M1	372 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PRPF39	Q86UA1	669 aa	Known RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SLC35B2	Q8TB61	432 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ACTL9	Q8TC94	416 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PIH1D2	Q8WWB5	315 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	NUP205	Q92621	2012 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	IMP4	Q96G21	291 aa	Known RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ZNF830	Q96NB3	372 aa	Predicted RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TRIB3	Q96RU7	358 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SEMA3C	Q99985	751 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	GORASP1	Q9BQQ3	440 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	HEMGN	Q9BXL5	484 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TDRD1	Q9BXT4	1180 aa	Known RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	POLR1E	Q9GZS1	481 aa	Known RBP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ATP13A3	Q9H7F0	1226 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	NT5M	Q9NPB1	228 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PCDH12	Q9NPG4	1184 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	LZTFL1	Q9NQ48	299 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	DYRK4	Q9NR20	520 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RBM22	Q9NW64	420 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	DLL3	Q9NYJ7	618 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PCDHGC4	Q9Y5F7	938 aa		10.2	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	FAM208B	Q5VWN6	2430 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PLXNA2	O75051	1894 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TBC1D3D	A0A087WVF3	549 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TBC1D3I	A0A087WXS9	549 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TBC1D3E	A0A087X179	549 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TBC1D3K	A0A087X1G2	549 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CFAP69	A5D8W1	941 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	FAM47DP	A6NHR8	397 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	HACD1	B0YJ81	288 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TBC1D3L	B9A6J9	549 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	KHNYN	O15037	678 aa	Known RBP	10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	JCHAIN	P01591	159 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PDHA1	P08559	390 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	TBC1D3H	P0C7X1	549 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	PRLR	P16471	622 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	ENG	P17813	658 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	LHCGR	P22888	699 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CTSK	P43235	329 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	NAP1L1	P55209	391 aa	Known RBP	10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	RPS21	P63220	83 aa	Known RBP	10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	BCL2L1	Q07817	233 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	CCDC15	Q0P6D6	951 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	GRIK2	Q13002	908 aa		10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SIX1	Q15475	284 aa	Predicted RBP	10.19	□□□□□ -0.78
CALCOCO1-222	ENST00000553154	SLC45A4	Q5BKX6	768 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms