RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 VPS28Q9UK41 221 aa9.16□□□□□ -0.94
RAB3IP-218ENST00000553099 STK38LQ9Y2H1 464 aa9.16□□□□□ -0.94
RAB3IP-218ENST00000553099 NUMBLQ9Y6R0 609 aa9.16□□□□□ -0.94
RAB3IP-218ENST00000553099 PRRC2BQ5JSZ5 2229 aaKnown RBP9.16□□□□□ -0.94
RAB3IP-218ENST00000553099 LOC285095A0A1B0GVY8 99 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 A0A1W2PRU2 124 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 SNNO75324 88 aaPredicted RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 SERPINE1P05121 402 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 FGF1P05230 155 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 C8AP07357 584 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 CTSAP10619 480 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 HLA-DPA1P20036 260 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 MZF1P28698 734 aaPredicted RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 HADHAP40939 763 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 RAB10P61026 200 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 SLC12A1Q13621 1099 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 PABPC1LQ4VXU2 614 aaKnown RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 RBM20Q5T481 1227 aaKnown RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 CXorf57Q6NSI4 855 aaKnown RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 GAREM2Q75VX8 874 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 CHST9Q7L1S5 443 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 CLNKQ7Z7G1 428 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 CLEC14AQ86T13 490 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 ALYREFQ86V81 257 aaKnown RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 SPNS2Q8IVW8 549 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 GABPB2Q8TAK5 448 aaPredicted RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 AGR3Q8TD06 166 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 TMA16Q96EY4 203 aaKnown RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 PRR11Q96HE9 360 aaPredicted RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 FEM1CQ96JP0 617 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 DNAJC1Q96KC8 554 aaKnown RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 TBATAQ96M53 351 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 RILPQ96NA2 401 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 PSKH2Q96QS6 385 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 TMEM106CQ9BVX2 250 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 IL21Q9HBE4 155 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 IL23AQ9NPF7 189 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 ACSS2Q9NR19 701 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 PLK2Q9NYY3 685 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 CXXC1Q9P0U4 656 aaPredicted RBP9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 PRKAG2Q9UGJ0 569 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 DNAJC16Q9Y2G8 782 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 ACOT9Q9Y305 439 aa9.15□□□□□ -0.94
RAB3IP-218ENST00000553099 LDB2O43679 373 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 CXCL14O95715 111 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 IL1BP01584 269 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 MYL4P12829 197 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 TNK2Q07912 1038 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 TPGS1Q6ZTW0 290 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 TTC7BQ86TV6 843 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 WDR75Q8IWA0 830 aaKnown RBP9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 OR13C4Q8NGS5 318 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 DDI1Q8WTU0 396 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 SREK1Q8WXA9 508 aaKnown RBP9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 RANBP9Q96S59 729 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 TCF25Q9BQ70 676 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 CORO1BQ9BR76 489 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 ACE2Q9BYF1 805 aaPredicted RBP9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 RUVBL2Q9Y230 463 aaKnown RBP9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 FNDC3AQ9Y2H6 1198 aaKnown RBP9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 PCDHGC4Q9Y5F7 938 aa9.15□□□□□ -0.95
RAB3IP-218ENST00000553099 CHD7Q9P2D1 2997 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 CARNS1A5YM72 827 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 INSIG1O15503 277 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 FGBP02675 491 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 ADH1AP07327 375 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 TAS2R39P59534 338 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 ARF5P84085 180 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 CREMQ03060 361 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 MSLNQ13421 630 aaPredicted RBP9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 DBN1Q16643 649 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 PLPP4Q5VZY2 271 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 CILP2Q8IUL8 1156 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 HJURPQ8NCD3 748 aaPredicted RBP9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 LPCAT1Q8NF37 534 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 PIWIL2Q8TC59 973 aaKnown RBP9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 WFDC5Q8TCV5 224 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 BADQ92934 168 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 TADA1Q96BN2 335 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 MOCOSQ96EN8 888 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 WWP1Q9H0M0 922 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 SMG9Q9H0W8 520 aaKnown RBP9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 ARMCX1Q9P291 453 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 LSM7Q9UK45 103 aaKnown RBP9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 ANKRD6Q9Y2G4 727 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 TBC1D30Q9Y2I9 924 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 CRYL1Q9Y2S2 319 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 SH3BP1Q9Y3L3 701 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 CDH23Q9H251 3354 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 ANKRD12Q6UB98 2062 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 CFAP73A6NFT4 308 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 MROH6A6NGR9 719 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 G3V2L1 256 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 CCL16O15467 120 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 TMCC1O94876 653 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 PAPSS2O95340 614 aaPredicted RBP9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 HSPA4LO95757 839 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 NDST3O95803 873 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 PDHA1P08559 390 aa9.14□□□□□ -0.95
RAB3IP-218ENST00000553099 NQO1P15559 274 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms