RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 TMEM259Q4ZIN3 620 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 SETMARQ53H47 684 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TBC1D3GQ6DHY5 549 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TBC1D3CQ6IPX1 549 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TCEAL6Q6IPX3 200 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 HORMAD1Q86X24 394 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 CAMK1DQ8IU85 385 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 KIAA2013Q8IYS2 634 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TBC1D3Q8IZP1 549 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TRIM58Q8NG06 486 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 TCEAL3Q969E4 200 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 QKIQ96PU8 341 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 IL12RB2Q99665 862 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 OSBPL8Q9BZF1 889 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 MIR1-1HGQ9H1L0 117 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 SMOC1Q9H4F8 434 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 SUV39H2Q9H5I1 410 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 DMTF1Q9Y222 760 aa11.83□□□□□ -0.52
TRAFD1-209ENST00000552896 CABIN1Q9Y6J0 2220 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 A0A1W2PQ67 120 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 HACD1B0YJ81 288 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 KCNK1O00180 336 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 TRAFD1O14545 582 aaPredicted RBP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 MTSS1O43312 755 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 HTRA2O43464 458 aaPredicted RBP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 TJP3O95049 919 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 HLA-DQB2P05538 268 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 PYGMP11217 842 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 CES1P23141 567 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 MAOBP27338 520 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 MMP12P39900 470 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 GRIA4P48058 902 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 AFF3P51826 1226 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 MAXP61244 160 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 RPS21P63220 83 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 RACK1P63244 317 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 ZBTB17Q13105 803 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 XRCC4Q13426 336 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 LLGL1Q15334 1064 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 ZNF284Q2VY69 593 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 AASDHQ4L235 1098 aaPredicted RBP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 NAPEPLDQ6IQ20 393 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 PRPF39Q86UA1 669 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 TFB1MQ8WVM0 346 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 EDEM2Q9BV94 578 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 HEMGNQ9BXL5 484 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 NOD2Q9HC29 1040 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 TM9SF3Q9HD45 589 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 RBM22Q9NW64 420 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 SAE1Q9UBE0 346 aaPredicted RBP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 SLC6A14Q9UN76 642 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 ITM2BQ9Y287 266 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 ATP8A1Q9Y2Q0 1164 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 TTLL3Q9Y4R7 772 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 MYLKQ15746 1914 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 DCHS1Q96JQ0 3298 aa11.82□□□□□ -0.52
TRAFD1-209ENST00000552896 A0A1W2PQU0 124 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 NEMP1O14524 444 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 ZNF189O75820 626 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 PCDH8O95206 1070 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 CPP00450 1065 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 TIMP2P16035 220 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 CA4P22748 312 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 XPAP23025 273 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 LIMK1P53667 647 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 ARHGAP8P85298 464 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 DSC2Q02487 901 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 TEAD4Q15561 434 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 SLC14A2Q15849 920 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 UGP2Q16851 508 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 SLC45A4Q5BKX6 768 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 LRRC73Q5JTD7 316 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 MEI1Q5TIA1 1274 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 CCDC181Q5TID7 509 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 SEL1L3Q68CR1 1132 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 ERAP2Q6P179 960 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 ZSWIM9Q86XI8 627 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 NETO1Q8TDF5 533 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 LRRN4Q8WUT4 740 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 HAUS1Q96CS2 278 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 NSMCE3Q96MG7 304 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 SLC6A18Q96N87 628 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 SEMA3CQ99985 751 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 HERPUD2Q9BSE4 406 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 ZDHHC5Q9C0B5 715 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 EBF2Q9HAK2 575 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 PCDH12Q9NPG4 1184 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 GGT7Q9UJ14 662 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 ZFR2Q9UPR6 939 aaKnown RBP11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 SLCO1B1Q9Y6L6 691 aa11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 TDRD6O60522 2096 aaKnown RBP11.81□□□□□ -0.52
TRAFD1-209ENST00000552896 GOLGA6L9A6NEM1 432 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 PRAMEF26H0Y7S4 382 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 ZSCAN12O43309 604 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 JCHAINP01591 159 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 SYPP08247 313 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 ENGP17813 658 aa11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 HNRNPA2B1P22626 353 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-209ENST00000552896 NFKBIAP25963 317 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms