RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SMRP1Q8NCR6 262 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 STKLD1Q8NE28 680 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 SCAMP5Q8TAC9 235 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 UBE2Q2Q8WVN8 375 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 CTNNBL1Q8WYA6 563 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 SMG7Q92540 1137 aaKnown RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 FBXO32Q969P5 355 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 GCNAQ96QF7 691 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 FOXB1Q99853 325 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 S1PR5Q9H228 398 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 TLR8Q9NR97 1041 aaKnown RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 OLA1Q9NTK5 396 aaKnown RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 SPTLC3Q9NUV7 552 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 INTS7Q9NVH2 962 aaKnown RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 RRN3Q9NYV6 651 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 TAS2R14Q9NYV8 317 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 TRPM5Q9NZQ8 1165 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 UVRAGQ9P2Y5 699 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 ZFR2Q9UPR6 939 aaKnown RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 ZFP37Q9Y6Q3 630 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 PTPRDP23468 1912 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 PLXNA3P51805 1871 aa5.96□□□□□ -1.45
SCAF11-213ENST00000550629 ATG2AQ2TAZ0 1938 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 A0A0A6YYK5 440 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 TCRBV5S1A1TA0A578 114 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 SIGLEC16A6NMB1 481 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 YJEFN3A6XGL0 299 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 E7ENQ6 273 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 OVOL3O00110 214 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF263O14978 683 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 LINC01565O15544 149 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 PJA2O43164 708 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 TBX10O75333 385 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 DAB1O75553 588 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 MTA2O94776 668 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 OLFM2O95897 454 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 PRLP01236 227 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 CYP1A2P05177 515 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 RHOP08100 348 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 CCDC175P0C221 793 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 KRT3P12035 628 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 DESP17661 470 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 CR2P20023 1033 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 RRM1P23921 792 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 PTX3P26022 381 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 MATKP42679 507 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 MAGEA1P43355 309 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 KPNA1P52294 538 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 GALCP54803 685 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 HADHBP55084 474 aaKnown RBP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 YWHAGP61981 247 aaKnown RBP eCLIP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 MTA1Q13330 715 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 MAMLD1Q13495 774 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 NFYCQ13952 458 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 ARHGAP15Q53QZ3 475 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 RARS2Q5T160 578 aaKnown RBP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 FAM102AQ5T9C2 384 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 AGBL4Q5VU57 503 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 SDHAF4Q5VUM1 108 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 BSPRYQ5W0U4 402 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 MSANTD2Q6P1R3 559 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 DNAJC24Q6P3W2 148 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 FAM183BPQ6ZVS7 135 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 USP30Q70CQ3 517 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 BHLHA9Q7RTU4 235 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 SCD5Q86SK9 330 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 TMEM150AQ86TG1 271 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 RHOT2Q8IXI1 618 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 SUSD6Q92537 303 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 MRPS31Q92665 395 aaKnown RBP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 NT5C3BQ969T7 300 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF653Q96CK0 615 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 SLC2A13Q96QE2 648 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 DPYSL5Q9BPU6 564 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 NCAPGQ9BPX3 1015 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 C11orf70Q9BRQ4 267 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 ULBP1Q9BZM6 244 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 TSGA10Q9BZW7 698 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 UBE2ZQ9H832 354 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 POPDC2Q9HBU9 364 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 WDR6Q9NNW5 1121 aaKnown RBP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 ABCC13Q9NSE7 274 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 GDE1Q9NZC3 331 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 DNMT3BQ9UBC3 853 aaKnown RBP5.96□□□□□ -1.46
SCAF11-213ENST00000550629 CD207Q9UJ71 328 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 OAZ3Q9UMX2 235 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 FAM50BQ9Y247 325 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 PAXBP1Q9Y5B6 917 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 PCDHA13Q9Y5I0 950 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 CDH23Q9H251 3354 aa5.96□□□□□ -1.46
SCAF11-213ENST00000550629 TRAV19A0A0A6YYK7 116 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 TMEM191CA6NGB0 347 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 TMCO5BA8MYB1 307 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 CCP110O43303 1012 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 ZSCAN12O43309 604 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 F9P00740 461 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 OAS1P00973 400 aaKnown RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 FYNP06241 537 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 SLC2A3P11169 496 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms