RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ATMQ13315 3056 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 SERINC3Q13530 473 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 EFHC2Q5JST6 749 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 FKBP15Q5T1M5 1219 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 FAXCQ5TGI0 409 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 WDR48Q8TAF3 677 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 HCAR2Q8TDS4 363 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 SNRNP27Q8WVK2 155 aaKnown RBP21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 HMCESQ96FZ2 354 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 WRAP53Q9BUR4 548 aaKnown RBP21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 LHX3Q9UBR4 397 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 PADI4Q9UM07 663 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 RP1P56715 2156 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 CASC3O15234 703 aaKnown RBP21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 INSIG1O15503 277 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 CCP110O43303 1012 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 TPM2P07951 284 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 PEX5P50542 639 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 ZNF143P52747 638 aaPredicted RBP21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 RHDQ02161 417 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 IRF4Q15306 451 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 CYTH1Q15438 398 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 PARP15Q460N3 678 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 ARHGAP40Q5TG30 622 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 SCYL2Q6P3W7 929 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 MON1BQ7L1V2 547 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 UMODL1-AS1Q8N2C9 162 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 WBP1Q96G27 269 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 FZD10Q9ULW2 581 aa21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 FLNBO75369 2602 aaKnown RBP21.92■■□□□ 1.1
SMARCC2-210ENST00000550519 TSPAN11A1L157 253 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 CDRT15L2A8MXV6 281 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 BLKP51451 505 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 PDX1P52945 283 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 AIF1P55008 147 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 CFHR1Q03591 330 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 ELP6Q0PNE2 266 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 LRRC14Q15048 493 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 SYCP1Q15431 976 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 WSCD2Q2TBF2 565 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 ESRP1Q6NXG1 681 aaKnown RBP21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 FSTL5Q8N475 847 aaPredicted RBP21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 CCDC3Q9BQI4 270 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 CATSPERBQ9H7T0 1116 aa21.91■■□□□ 1.1
SMARCC2-210ENST00000550519 PMS2P1A4D2B8 440 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 TMEM110-MUSTN1A8MSY1 372 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 NTN3O00634 580 aaPredicted RBP21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 CREB3O43889 395 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 PIGNO95427 931 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 CELA2BP08218 269 aaPredicted RBP21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 HK3P52790 923 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 RPL7AP62424 266 aaKnown RBP21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 UGP2Q16851 508 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 PPP1R15BQ5SWA1 713 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 DNAJC24Q6P3W2 148 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 LVRNQ6Q4G3 990 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 WDR36Q8NI36 951 aaKnown RBP21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 EXOC2Q96KP1 924 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 SUV39H2Q9H5I1 410 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 FANCLQ9NW38 375 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 COQ6Q9Y2Z9 468 aa21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 SETXQ7Z333 2677 aaKnown RBP21.9■■□□□ 1.1
SMARCC2-210ENST00000550519 PLA2G2AP14555 144 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 XPAP23025 273 aaPredicted RBP21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 MLLT3P42568 568 aaPredicted RBP21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 COPB1P53618 953 aaKnown RBP21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 VAC14Q08AM6 782 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 GRM3Q14832 879 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 AGERQ15109 404 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 ELOCQ15369 112 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 ALG11Q2TAA5 492 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 TAF1BQ53T94 588 aaPredicted RBP21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 CLEC14AQ86T13 490 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 ZNF605Q86T29 641 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 DNAAF5Q86Y56 855 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 SDR16C5Q8N3Y7 309 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 ARL10Q8N8L6 244 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 TSACCQ96A04 125 aaPredicted RBP21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 CCDC97Q96F63 343 aaPredicted RBP21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 MCEEQ96PE7 176 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 NCAPGQ9BPX3 1015 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 CNPY3Q9BT09 278 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 EDEM3Q9BZQ6 932 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 LRRC19Q9H756 370 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 PDFQ9HBH1 243 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 PCDH12Q9NPG4 1184 aa21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 UBA2Q9UBT2 640 aaPredicted RBP21.89■■□□□ 1.09
SMARCC2-210ENST00000550519 CCDC187A0A096LP49 1063 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 CAPN8A6NHC0 703 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 FGF10O15520 208 aaPredicted RBP21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 ZIC2O95409 532 aaPredicted RBP21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 ALPIP09923 528 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 C6P13671 934 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 SPIDRQ14159 915 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 NFATC4Q14934 902 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 HID1Q8IV36 788 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 ARL14Q8N4G2 192 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 NEK11Q8NG66 645 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 PCDH19Q8TAB3 1148 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 SCG3Q8WXD2 468 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms