RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 LRRC74BQ6ZQY2 392 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 CHST9Q7L1S5 443 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 DENND6AQ8IWF6 608 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 HOMEZQ8IX15 550 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 OR6P1Q8NGX9 317 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 PSMG2Q969U7 264 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 PRR11Q96HE9 360 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 TCF12Q99081 682 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 OMDQ99983 421 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 CINPQ9BW66 212 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 SYTL2Q9HCH5 934 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 INTS10Q9NVR2 710 aaKnown RBP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 ZNF358Q9NW07 568 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 UXTQ9UBK9 157 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 NKX1-2Q9UD57 310 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 NUDT5Q9UKK9 219 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 MAFFQ9ULX9 164 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 VWA7Q9Y334 891 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 TDRD15B5MCY1 1934 aaKnown RBP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 THSD7BQ9C0I4 1608 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 E2F8A0AVK6 867 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 CCDC78A2IDD5 438 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 F8W810 466 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 GOLGA8TH3BQL2 631 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 J3KR12 359 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 TK2O00142 265 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 DCXO43602 365 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 KDELR3O43731 214 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 TBC1D4O60343 1298 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 DLX3O60479 287 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 RPP40O75818 363 aaKnown RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 IPO13O94829 963 aaKnown RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 NDST3O95803 873 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 LATS1O95835 1130 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 GM2AP17900 193 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 ARNTP27540 789 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 GABRB3P28472 473 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 AVPR1AP37288 418 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 SLC11A1P49279 550 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 ALDH7A1P49419 539 aaKnown RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 GPR15P49685 360 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 OXCT1P55809 520 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 USP46P62068 366 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 MRPS35P82673 323 aaKnown RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 MPP1Q00013 466 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 PFKPQ01813 784 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 DSC2Q02487 901 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 GNA12Q03113 381 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 ZNF177Q13360 481 aaPredicted RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 CUL3Q13618 768 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 CYLC2Q14093 348 aaPredicted RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 SMAD1Q15797 465 aaKnown RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 USP41Q3LFD5 358 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 RALGPS1Q5JS13 557 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 SIRPB2Q5JXA9 342 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 HECTD3Q5T447 861 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 HECTD2Q5U5R9 776 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 SDHAF4Q5VUM1 108 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 TPGS2Q68CL5 300 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 ALG1LQ6GMV1 187 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 SLC8B1Q6J4K2 584 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 KIAA1841Q6NSI8 718 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 RNF19BQ6ZMZ0 732 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 RIPOR1Q6ZS17 1223 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 TRIM67Q6ZTA4 783 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 MAVSQ7Z434 540 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 CILP2Q8IUL8 1156 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 HERC6Q8IVU3 1022 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 CENPLQ8N0S6 344 aaPredicted RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 LGI2Q8N0V4 545 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 CCNYL1Q8N7R7 359 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 DBF4BQ8NFT6 615 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 CEP70Q8NHQ1 597 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 ARRDC2Q8TBH0 407 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 BRSK1Q8TDC3 778 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 HEXDCQ8WVB3 486 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 USP13Q92995 863 aaPredicted RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 IGSF8Q969P0 613 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 NXNL1Q96CM4 212 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 ZNF512Q96ME7 567 aaPredicted RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 SEMA3CQ99985 751 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 ADGRE3Q9BY15 652 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 GPR62Q9BZJ7 368 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 CCDC68Q9H2F9 335 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 VCXQ9H320 206 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 POMKQ9H5K3 350 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 EFCAB1Q9HAE3 211 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 NDFIP2Q9NV92 336 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9□□□□□ -0.97
TMEM116-209ENST00000550020 TRPM5Q9NZQ8 1165 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 UBA2Q9UBT2 640 aaPredicted RBP9□□□□□ -0.97
TMEM116-209ENST00000550020 SLC7A8Q9UHI5 535 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 VPS28Q9UK41 221 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 SSX2IPQ9Y2D8 614 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 LRCH1Q9Y2L9 728 aa9□□□□□ -0.97
TMEM116-209ENST00000550020 SEC23IPQ9Y6Y8 1000 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms