RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 SMOC1Q9H4F8 434 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 SEPT10Q9P0V9 454 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 A0A1B0GTW7 788 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 A0A1W2PQ67 120 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 A0A1W2PQU0 124 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 UPK3BL1B0FP48 263 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 PRR5-ARHGAP8B1AHC4 643 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 PATE3B3GLJ2 98 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 UPK3BL2E5RIL1 263 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 NEMP1O14524 444 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 TRAFD1O14545 582 aaPredicted RBP19.53■□□□□ 0.72
DDX54-207ENST00000550016 AREL1O15033 823 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 BCAT2O15382 392 aaPredicted RBP19.53■□□□□ 0.72
DDX54-207ENST00000550016 HTRA2O43464 458 aaPredicted RBP19.53■□□□□ 0.72
DDX54-207ENST00000550016 SERPINF2P08697 491 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 POLR2LP62875 67 aaKnown RBP19.53■□□□□ 0.72
DDX54-207ENST00000550016 OTUD4Q01804 1114 aaKnown RBP19.53■□□□□ 0.72
DDX54-207ENST00000550016 DSC2Q02487 901 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 ZBTB17Q13105 803 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 SF3A2Q15428 464 aaKnown RBP19.53■□□□□ 0.72
DDX54-207ENST00000550016 UGP2Q16851 508 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 SLC45A4Q5BKX6 768 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 SLC23A3Q6PIS1 610 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 HORMAD1Q86X24 394 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 CNTD1Q8N815 330 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 ACTL9Q8TC94 416 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 QKIQ96PU8 341 aaKnown RBP eCLIP19.53■□□□□ 0.72
DDX54-207ENST00000550016 ORAI3Q9BRQ5 295 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 EBF2Q9HAK2 575 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 TTLL3Q9Y4R7 772 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 PCDHGC4Q9Y5F7 938 aa19.53■□□□□ 0.72
DDX54-207ENST00000550016 KNL1Q8NG31 2342 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 GOLGA6L9A6NEM1 432 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 H7C0C1 242 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 CFIP05156 583 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 MAT2AP31153 395 aaKnown RBP19.52■□□□□ 0.72
DDX54-207ENST00000550016 ATP5OP48047 213 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 RPS21P63220 83 aaKnown RBP19.52■□□□□ 0.72
DDX54-207ENST00000550016 IRX4P78413 519 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 ELP6Q0PNE2 266 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 ZNF284Q2VY69 593 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 SETMARQ53H47 684 aaPredicted RBP19.52■□□□□ 0.72
DDX54-207ENST00000550016 TEX44Q53QW1 395 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 TRIM61Q5EBN2 209 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 SEL1L2Q5TEA6 688 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 KIAA1161Q6NSJ0 714 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 PRR23CQ6ZRP0 262 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 ZSCAN30Q86W11 494 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 ZSWIM9Q86XI8 627 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 ZCCHC9Q8N567 271 aaKnown RBP19.52■□□□□ 0.72
DDX54-207ENST00000550016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.52■□□□□ 0.72
DDX54-207ENST00000550016 C12orf50Q8NA57 414 aaPredicted RBP19.52■□□□□ 0.72
DDX54-207ENST00000550016 TTC13Q8NBP0 860 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 ARRDC2Q8TBH0 407 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 NUSAP1Q9BXS6 441 aaKnown RBP19.52■□□□□ 0.72
DDX54-207ENST00000550016 TRMT1Q9NXH9 659 aaKnown RBP19.52■□□□□ 0.72
DDX54-207ENST00000550016 SLC6A14Q9UN76 642 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 ZFR2Q9UPR6 939 aaKnown RBP19.52■□□□□ 0.72
DDX54-207ENST00000550016 DMTF1Q9Y222 760 aa19.52■□□□□ 0.72
DDX54-207ENST00000550016 PCDH15Q96QU1 1955 aa19.52■□□□□ 0.71
DDX54-207ENST00000550016 SPINT1O43278 529 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 PTPN3P26045 913 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 EIF3EP60228 445 aaKnown RBP19.51■□□□□ 0.71
DDX54-207ENST00000550016 NIPAL4Q0D2K0 466 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 KLF1Q13351 362 aaPredicted RBP19.51■□□□□ 0.71
DDX54-207ENST00000550016 TMEM259Q4ZIN3 620 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 LRRC73Q5JTD7 316 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 TCEAL6Q6IPX3 200 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 KIAA2013Q8IYS2 634 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 PDCD6IPQ8WUM4 868 aaKnown RBP19.51■□□□□ 0.71
DDX54-207ENST00000550016 SPOCK2Q92563 424 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 TCEAL3Q969E4 200 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 AGAP3Q96P47 875 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 TLR10Q9BXR5 811 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 CEP41Q9BYV8 373 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 CARD9Q9H257 536 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 CAPN10Q9HC96 672 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 TM9SF3Q9HD45 589 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 PCDH12Q9NPG4 1184 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 GGT7Q9UJ14 662 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 ITM2BQ9Y287 266 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 RAI2Q9Y5P3 530 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 SLCO1B1Q9Y6L6 691 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 TMEM131Q92545 1883 aa19.51■□□□□ 0.71
DDX54-207ENST00000550016 KCNK3O14649 394 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 RIOK3O14730 519 aaKnown RBP19.5■□□□□ 0.71
DDX54-207ENST00000550016 ITIH2P19823 946 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 AFF3P51826 1226 aaKnown RBP19.5■□□□□ 0.71
DDX54-207ENST00000550016 RACK1P63244 317 aaKnown RBP19.5■□□□□ 0.71
DDX54-207ENST00000550016 WASHC5Q12768 1159 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 TRAF2Q12933 501 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 IHHQ14623 411 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 TMEM52BQ4KMG9 183 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 ARMC12Q5T9G4 340 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 SEL1L3Q68CR1 1132 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 ERAP2Q6P179 960 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 HTR3CQ8WXA8 447 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 KLK6Q92876 244 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 SERAC1Q96JX3 654 aa19.5■□□□□ 0.71
DDX54-207ENST00000550016 TEKT5Q96M29 485 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms