RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 IL27RAQ6UWB1 636 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 FAM151BQ6UXP7 276 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 BHLHE22Q8NFJ8 381 aaPredicted RBP15.11■□□□□ 0.01
CUX1-214ENST00000550008 SPPL2BQ8TCT7 592 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 SEC14L1Q92503 715 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 OLFM3Q96PB7 478 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 RBBP8Q99708 897 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 GKN1Q9NS71 199 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 EIF3LQ9Y262 564 aaKnown RBP15.11■□□□□ 0.01
CUX1-214ENST00000550008 TEX264Q9Y6I9 313 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 DDX60Q8IY21 1712 aaKnown RBP15.11■□□□□ 0.01
CUX1-214ENST00000550008 CD3EAPO15446 510 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 PRKCGP05129 697 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 SERPINA6P08185 405 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 GABRR2P28476 465 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 LRPAP1P30533 357 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 CORO1AP31146 461 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 CLCN5P51795 746 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 LIMK2P53671 638 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 CACNA2D1P54289 1103 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 ZNF284Q2VY69 593 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 EFL1Q7Z2Z2 1120 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 PIWIL4Q7Z3Z4 852 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 ITIH5Q86UX2 942 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 NPAS2Q99743 824 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 TBCDQ9BTW9 1192 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 MRPL17Q9NRX2 175 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 STAU1O95793 577 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 VAV1P15498 845 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 CDH5P33151 784 aaPredicted RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 PIK3CGP48736 1102 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 TRIM32Q13049 653 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 TBCELQ5QJ74 424 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 FAM126BQ8IXS8 530 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 DNAJB14Q8TBM8 379 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 MED8Q96G25 268 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 CDK5RAP1Q96SZ6 601 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 C2orf49Q9BVC5 232 aaPredicted RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 RGS17Q9UGC6 210 aaPredicted RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 MAGEA13PA6NCF6 341 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 CPSF4O95639 269 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 SOAT1P35610 550 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 SKIV2LQ15477 1246 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 LACTB2Q53H82 288 aaPredicted RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 STXBP5Q5T5C0 1151 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 CLEC6AQ6EIG7 209 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 OTOP2Q7RTS6 562 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 HPS6Q86YV9 775 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 DNAJC1Q96KC8 554 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 MRPL57Q9BQC6 102 aaKnown RBP15.1■□□□□ 0.01
CUX1-214ENST00000550008 KLQ9UEF7 1012 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 IRAK2O43187 625 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 CHRNGP07510 517 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 LINC00032P0C843 101 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 SELPP16109 830 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 CACHD1Q5VU97 1274 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 NAT16Q8N8M0 369 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 OR4L1Q8NH43 312 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 STAG3L4Q8TBR4 150 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 PARVBQ9HBI1 364 aa15.1■□□□□ 0.01
CUX1-214ENST00000550008 A0A087X1B8 175 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 TMEM247A6NEH6 219 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 OR6C75A6NL08 312 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 EVPLLA8MZ36 301 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 HGFP14210 728 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 AIF1P55008 147 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 SLC10A2Q12908 348 aaPredicted RBP15.09■□□□□ 0.01
CUX1-214ENST00000550008 RINLQ6ZS11 566 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 ZFP14Q9HCL3 533 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 AK5Q9Y6K8 562 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 COL2A1P02458 1487 aaPredicted RBP15.09■□□□□ 0.01
CUX1-214ENST00000550008 SEC22BO75396 215 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 INHAP05111 366 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 TACR2P21452 398 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 PSEN1P49768 467 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 AFF1P51825 1210 aaKnown RBP15.09■□□□□ 0.01
CUX1-214ENST00000550008 SLC10A7Q0GE19 358 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 ARHGAP36Q6ZRI8 547 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 GPRIN1Q7Z2K8 1008 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 PGBD3Q8N328 593 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 CDH19Q9H159 772 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 LRMDAQ9H2I8 198 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 MTIF3Q9H2K0 278 aaKnown RBP15.09■□□□□ 0.01
CUX1-214ENST00000550008 MIOSQ9NXC5 875 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 PIRO00625 290 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 HSPA1AP0DMV8 641 aaKnown RBP15.09■□□□□ 0.01
CUX1-214ENST00000550008 HSPA1BP0DMV9 641 aaKnown RBP15.09■□□□□ 0.01
CUX1-214ENST00000550008 ATP6V1B2P21281 511 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 PIK3R1P27986 724 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 LDLRAD1Q5T700 205 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 TTC33Q6PID6 262 aaPredicted RBP15.09■□□□□ 0.01
CUX1-214ENST00000550008 CNSTQ6PJW8 725 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 FSTL5Q8N475 847 aaPredicted RBP15.09■□□□□ 0.01
CUX1-214ENST00000550008 AUTS2Q8WXX7 1259 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 SPATA16Q9BXB7 569 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 OSGEPL1Q9H4B0 414 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 TIMM22Q9Y584 194 aa15.09■□□□□ 0.01
CUX1-214ENST00000550008 A0A0U1RQF3 1178 aa15.08■□□□□ 0.01
CUX1-214ENST00000550008 ZSCAN9O15535 394 aaPredicted RBP15.08■□□□□ 0.01
CUX1-214ENST00000550008 ITM2AO43736 263 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms