RNA–Protein interactions for RNA: ENST00000548965.1

TMEM106C-210, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-210ENST00000548965 LRRC38Q5VT99 294 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 TIGD7Q6NT04 549 aaPredicted RBP8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 C11orf63Q6NUN7 778 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 ERAP2Q6P179 960 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 BRAT1Q6PJG6 821 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 KDM7AQ6ZMT4 941 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 PIP4P1Q86T03 277 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 DAAM2Q86T65 1068 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 KIAA1328Q86T90 577 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 TTC7BQ86TV6 843 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 RFX6Q8HWS3 928 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 TMEM139Q8IV31 216 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 PGBD5Q8N414 524 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 MFSD2AQ8NA29 543 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 OR13H1Q8NG92 308 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 CXorf40AQ8TE69 158 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 SETD7Q8WTS6 366 aaKnown RBP8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 PDCD6IPQ8WUM4 868 aaKnown RBP8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 LRRN4Q8WUT4 740 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 RNF25Q96BH1 459 aaPredicted RBP8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 ZNF641Q96N77 438 aaPredicted RBP8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 CAMK1GQ96NX5 476 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 RNF157Q96PX1 679 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 ELF4Q99607 663 aaPredicted RBP8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 DESI2Q9BSY9 194 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 SUV39H2Q9H5I1 410 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 NT5MQ9NPB1 228 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 PCDH12Q9NPG4 1184 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 SCUBE2Q9NQ36 999 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 DDX56Q9NY93 547 aaKnown RBP8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 DTLQ9NZJ0 730 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 IMPACTQ9P2X3 320 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 ATP8A1Q9Y2Q0 1164 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 HEY1Q9Y5J3 304 aa8.68□□□□□ -1.02
TMEM106C-210ENST00000548965 EPG5Q9HCE0 2579 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 A0A1B0GTQ1 180 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 SPAARA0A1B0GVQ0 90 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 ZNF487B1APH4 448 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 RAD51BO15315 384 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 FLRT2O43155 660 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 SH3BP5O60239 455 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 ZFC3H1O60293 1989 aaKnown RBP8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 MAGEC1O60732 1142 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 MMP20O60882 483 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 SOCS5O75159 536 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 NEBLO76041 1014 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 PAK4O96013 591 aaPredicted RBP8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 CPP00450 1065 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 ZNF883P0CG24 379 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 THEGLP0DJG4 465 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 C6P13671 934 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 CEACAM1P13688 526 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 TIMP2P16035 220 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 MX2P20592 715 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 EPHA8P29322 1005 aaPredicted RBP8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 MMP12P39900 470 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 CSNK1DP48730 415 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 ARRB1P49407 418 aaPredicted RBP8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 VAV2P52735 878 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 NAP1L1P55209 391 aaKnown RBP8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 FOXK2Q01167 660 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 NSUN2Q08J23 767 aaKnown RBP eCLIP8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 ELP6Q0PNE2 266 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 OVGP1Q12889 678 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 SGCGQ13326 291 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 LLGL1Q15334 1064 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 IFI16Q16666 785 aaKnown RBP8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 UGP2Q16851 508 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 INAVAQ3KP66 663 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 KAZNQ674X7 775 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 SLC9A4Q6AI14 798 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 MFSD7Q6UXD7 560 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 KYAT3Q6YP21 454 aaKnown RBP8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 IQCHQ86VS3 1027 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 ZSCAN30Q86W11 494 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 VSIG1Q86XK7 387 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 SPATS2Q86XZ4 545 aaKnown RBP8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 GATAD2AQ86YP4 633 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 CCDC50Q8IVM0 306 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 SLC22A18ASQ8N1D0 253 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 OXR1Q8N573 874 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 PLD5Q8N7P1 536 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 CCNYQ8ND76 341 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 TPCN2Q8NHX9 752 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 HDAC11Q96DB2 347 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 ECHDC3Q96DC8 303 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 KLHDC7BQ96G42 594 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 FEM1CQ96JP0 617 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 NSMCE3Q96MG7 304 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 NUDCD1Q96RS6 583 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 SLC17A9Q9BYT1 436 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 POLR1EQ9GZS1 481 aaKnown RBP8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 SALL4Q9UJQ4 1053 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 ALG6Q9Y672 507 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 USP24Q9UPU5 2620 aa8.67□□□□□ -1.02
TMEM106C-210ENST00000548965 MYLKQ15746 1914 aa8.66□□□□□ -1.02
TMEM106C-210ENST00000548965 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.66□□□□□ -1.02
TMEM106C-210ENST00000548965 MACROD2A1Z1Q3 448 aa8.66□□□□□ -1.02
TMEM106C-210ENST00000548965 POM121BA6NF01 834 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms