RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 D6RAR5 112 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 F8VZ95 297 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 TM7SF2O76062 418 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 PIGNO95427 931 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 POP4O95707 220 aaKnown RBP16.65■□□□□ 0.26
SSH1-208ENST00000548522 TIMP2P16035 220 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 ETFBP38117 255 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 HDAC4P56524 1084 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 YPEL5P62699 121 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 NRG1Q02297 640 aaPredicted RBP16.65■□□□□ 0.26
SSH1-208ENST00000548522 PPARDQ03181 441 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 HID1Q8IV36 788 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 SFTPA2Q8IWL1 248 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 SDR16C5Q8N3Y7 309 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 EXD3Q8N9H8 876 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 CXorf40AQ8TE69 158 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 GLMNQ92990 594 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 ARHGEF26Q96DR7 871 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 CCDC97Q96F63 343 aaPredicted RBP16.65■□□□□ 0.26
SSH1-208ENST00000548522 LIN37Q96GY3 246 aaPredicted RBP16.65■□□□□ 0.26
SSH1-208ENST00000548522 TBATAQ96M53 351 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 GDAP1L1Q96MZ0 367 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 TUBGCP2Q9BSJ2 902 aa16.65■□□□□ 0.26
SSH1-208ENST00000548522 NOCTQ9UK39 431 aaKnown RBP16.65■□□□□ 0.26
SSH1-208ENST00000548522 TLN1Q9Y490 2541 aaKnown RBP16.65■□□□□ 0.26
SSH1-208ENST00000548522 CXorf51AA0A1B0GTR3 108 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 C2CD4BA6NLJ0 364 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 PLD2O14939 933 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 BUB1O43683 1085 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 NOBOXO60393 691 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 RPLP0P05388 317 aaKnown RBP16.64■□□□□ 0.25
SSH1-208ENST00000548522 UCHL3P15374 230 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 SLC5A2P31639 672 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 UGT1A5P35504 534 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 HK3P52790 923 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 GEMIN4P57678 1058 aaKnown RBP16.64■□□□□ 0.25
SSH1-208ENST00000548522 CCL7P80098 99 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 TPD52L1Q16890 204 aaPredicted RBP16.64■□□□□ 0.25
SSH1-208ENST00000548522 WSCD2Q2TBF2 565 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 ARL13BQ3SXY8 428 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 SMYD5Q6GMV2 418 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 ESRP1Q6NXG1 681 aaKnown RBP16.64■□□□□ 0.25
SSH1-208ENST00000548522 ARCQ7LC44 396 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 PRICKLE2Q7Z3G6 844 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 RD3Q7Z3Z2 195 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 PYROXD2Q8N2H3 581 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 SLC30A5Q8TAD4 765 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 TBC1D31Q96DN5 1066 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 PDXPQ96GD0 296 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 CCNL2Q96S94 520 aaPredicted RBP16.64■□□□□ 0.25
SSH1-208ENST00000548522 C11orf70Q9BRQ4 267 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 CPEB1Q9BZB8 566 aaKnown RBP16.64■□□□□ 0.25
SSH1-208ENST00000548522 TRIM4Q9C037 500 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 TTYH3Q9C0H2 523 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 MAGEH1Q9H213 219 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 CLMPQ9H6B4 373 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 ATXN7L1Q9ULK2 861 aaPredicted RBP16.64■□□□□ 0.25
SSH1-208ENST00000548522 OR1A2Q9Y585 309 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 UBR5O95071 2799 aaPredicted RBP16.64■□□□□ 0.25
SSH1-208ENST00000548522 CHD5Q8TDI0 1954 aa16.64■□□□□ 0.25
SSH1-208ENST00000548522 RIOK3O14730 519 aaKnown RBP16.63■□□□□ 0.25
SSH1-208ENST00000548522 KDELR3O43731 214 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 PRKCGP05129 697 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 PLEKP08567 350 aaPredicted RBP16.63■□□□□ 0.25
SSH1-208ENST00000548522 CHRNB2P17787 502 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 MMP8P22894 467 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 SDC4P31431 198 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 KLK7P49862 253 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 DPCR1Q3MIW9 517 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 RAB11FIP2Q7L804 512 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 ZNF354CQ86Y25 554 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 JAMLQ86YT9 394 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 FBXO39Q8N4B4 442 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 MSANTD4Q8NCY6 345 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 WDR48Q8TAF3 677 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 FAM172AQ8WUF8 416 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 HMCESQ96FZ2 354 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 GFM1Q96RP9 751 aaKnown RBP16.63■□□□□ 0.25
SSH1-208ENST00000548522 EDEM3Q9BZQ6 932 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 TMEM51Q9NW97 253 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.63■□□□□ 0.25
SSH1-208ENST00000548522 LHX3Q9UBR4 397 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 HPCAL4Q9UM19 191 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 GPR34Q9UPC5 381 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 DOLKQ9UPQ8 538 aa16.63■□□□□ 0.25
SSH1-208ENST00000548522 PES1O00541 588 aaKnown RBP16.62■□□□□ 0.25
SSH1-208ENST00000548522 GFPT2O94808 682 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 IGSF6O95976 241 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 CYP1A1P04798 512 aaPredicted RBP16.62■□□□□ 0.25
SSH1-208ENST00000548522 MLLT3P42568 568 aaPredicted RBP16.62■□□□□ 0.25
SSH1-208ENST00000548522 RHOAP61586 193 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 NFKB2Q00653 900 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 FMO1Q01740 532 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 NFATC3Q12968 1075 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 LRRC14Q15048 493 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 ELOCQ15369 112 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 LINC00303Q3SY05 128 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 ZSWIM9Q86XI8 627 aa16.62■□□□□ 0.25
SSH1-208ENST00000548522 FSTL5Q8N475 847 aaPredicted RBP16.62■□□□□ 0.25
SSH1-208ENST00000548522 MLKLQ8NB16 471 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms