RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 WASF2Q9Y6W5 498 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 ALOX15BO15296 676 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 FZD6O60353 706 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 PGLSO95336 258 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 NTSR1P30989 418 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 CHRNA4P43681 627 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 SESN2P58004 480 aaPredicted RBP29.01■■■□□ 2.23
BRF1-213ENST00000548421 DHX9Q08211 1270 aaKnown RBP29.01■■■□□ 2.23
BRF1-213ENST00000548421 GALNT3Q14435 633 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 SIRPB2Q5JXA9 342 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 SDE2Q6IQ49 451 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 SHDQ96IW2 340 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 OSBPL1AQ9BXW6 950 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 SUV39H2Q9H5I1 410 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 SAYSD1Q9NPB0 183 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 PCDHB9Q9Y5E1 797 aa29.01■■■□□ 2.23
BRF1-213ENST00000548421 PRLP01236 227 aa29■■■□□ 2.23
BRF1-213ENST00000548421 PDHA1P08559 390 aa29■■■□□ 2.23
BRF1-213ENST00000548421 WASP42768 502 aa29■■■□□ 2.23
BRF1-213ENST00000548421 GDPD4Q6W3E5 623 aa29■■■□□ 2.23
BRF1-213ENST00000548421 TMC3Q7Z5M5 1100 aa29■■■□□ 2.23
BRF1-213ENST00000548421 STK40Q8N2I9 435 aa29■■■□□ 2.23
BRF1-213ENST00000548421 IL17RCQ8NAC3 791 aa29■■■□□ 2.23
BRF1-213ENST00000548421 BFARQ9NZS9 450 aa29■■■□□ 2.23
BRF1-213ENST00000548421 MRPS17Q9Y2R5 130 aaKnown RBP29■■■□□ 2.23
BRF1-213ENST00000548421 MYLKQ15746 1914 aa29■■■□□ 2.23
BRF1-213ENST00000548421 KRBA1A5PL33 1030 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 RNF40O75150 1001 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 BANF1O75531 89 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 LEFTY1O75610 366 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 UGT2B4P06133 528 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 CTSLP07711 333 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 NPY2RP49146 381 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 RPL26P61254 145 aaKnown RBP28.99■■■□□ 2.23
BRF1-213ENST00000548421 ARSIQ5FYB1 569 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 FBXO38Q6PIJ6 1188 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 RELL1Q8IUW5 271 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 ZBED8Q8IZ13 594 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 LPCAT1Q8NF37 534 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 RMDN1Q96DB5 314 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 LRRC39Q96DD0 335 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 GABRG3Q99928 467 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 PRSS16Q9NQE7 514 aa28.99■■■□□ 2.23
BRF1-213ENST00000548421 RPL26L1Q9UNX3 145 aaKnown RBP28.99■■■□□ 2.23
BRF1-213ENST00000548421 SDR42E2A6NKP2 422 aa28.98■■■□□ 2.23
BRF1-213ENST00000548421 PRNPP04156 253 aa28.98■■■□□ 2.23
BRF1-213ENST00000548421 MGAT1P26572 445 aa28.98■■■□□ 2.23
BRF1-213ENST00000548421 STARD6P59095 220 aa28.98■■■□□ 2.23
BRF1-213ENST00000548421 HSF5Q4G112 596 aaPredicted RBP28.98■■■□□ 2.23
BRF1-213ENST00000548421 CFAP58Q5T655 872 aa28.98■■■□□ 2.23
BRF1-213ENST00000548421 PAF1Q8N7H5 531 aa28.98■■■□□ 2.23
BRF1-213ENST00000548421 ECHDC3Q96DC8 303 aa28.98■■■□□ 2.23
BRF1-213ENST00000548421 TXLNGYQ9BZA5 131 aa28.98■■■□□ 2.23
BRF1-213ENST00000548421 IL22Q9GZX6 179 aa28.98■■■□□ 2.23
BRF1-213ENST00000548421 MUTYHQ9UIF7 546 aa28.98■■■□□ 2.23
BRF1-213ENST00000548421 A0A1W2PQ67 120 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 SYNCRIPO60506 623 aaKnown RBP28.97■■■□□ 2.23
BRF1-213ENST00000548421 KLF8O95600 359 aaPredicted RBP28.97■■■□□ 2.23
BRF1-213ENST00000548421 ALADP13716 330 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 MAGEA4P43358 317 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 GRIA4P48058 902 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 CAMK2GQ13555 558 aaPredicted RBP28.97■■■□□ 2.23
BRF1-213ENST00000548421 FASTKD3Q14CZ7 662 aaKnown RBP28.97■■■□□ 2.23
BRF1-213ENST00000548421 DSG4Q86SJ6 1040 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 AGGF1Q8N302 714 aaeCLIP28.97■■■□□ 2.23
BRF1-213ENST00000548421 SIGLEC10Q96LC7 697 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 TEX264Q9Y6I9 313 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 ANKRD66B4E2M5 251 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 DYNC1I1O14576 645 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 TPH1P17752 444 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 EPHB1P54762 984 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 CERCAMQ5T4B2 595 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 SIX5Q8N196 739 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 ZNF687Q8N1G0 1237 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 MPP5Q8N3R9 675 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 TXNDC5Q8NBS9 432 aaKnown RBP28.97■■■□□ 2.23
BRF1-213ENST00000548421 TMIEQ8NEW7 156 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 SPOCK2Q92563 424 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 KLHL32Q96NJ5 620 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 FAM129BQ96TA1 746 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 SYBUQ9NX95 663 aa28.97■■■□□ 2.23
BRF1-213ENST00000548421 ADAM23O75077 832 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 CPP00450 1065 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 ELK3P41970 407 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 STARD3Q14849 445 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 CCDC38Q502W7 563 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 HP1BP3Q5SSJ5 553 aaPredicted RBP28.96■■■□□ 2.23
BRF1-213ENST00000548421 BEND6Q5SZJ8 279 aaPredicted RBP28.96■■■□□ 2.23
BRF1-213ENST00000548421 BRAT1Q6PJG6 821 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 FBXO36Q8NEA4 188 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 RPLP0P6Q8NHW5 317 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 PIH1D2Q8WWB5 315 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 WDR83Q9BRX9 315 aaKnown RBP28.96■■■□□ 2.23
BRF1-213ENST00000548421 ARFGAP3Q9NP61 516 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 CD320Q9NPF0 282 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 PPM1HQ9ULR3 514 aa28.96■■■□□ 2.23
BRF1-213ENST00000548421 KANSL1LA0AUZ9 987 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 CHRNB1P11230 501 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 HOXB2P14652 356 aa28.95■■■□□ 2.22
BRF1-213ENST00000548421 PMS2P54278 862 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms