RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SLC20A1Q8WUM9 679 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 SNRNP27Q8WVK2 155 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 SCG3Q8WXD2 468 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 EXTL1Q92935 676 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 VOPP1Q96AW1 172 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 GRAMD1AQ96CP6 724 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 TBC1D31Q96DN5 1066 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 ARHGEF26Q96DR7 871 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 C11orf70Q9BRQ4 267 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 ARHGAP9Q9BRR9 750 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 TUBGCP2Q9BSJ2 902 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 APOOQ9BUR5 198 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 C1QTNF7Q9BXJ2 289 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 MAGEH1Q9H213 219 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 TMEM248Q9NWD8 314 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 PISDQ9UG56 409 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 OR1A2Q9Y585 309 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 A0A1W2PQM1 296 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 NTN3O00634 580 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 LZTS3O60299 673 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 GFPT2O94808 682 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 IGSF6O95976 241 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 PCCBP05166 539 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 ITIH1P19827 911 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 SDC4P31431 198 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 MAPKAPK2P49137 400 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 HK3P52790 923 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 INHBCP55103 352 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 GEMIN4P57678 1058 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 INPP5AQ14642 412 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 LRRC14Q15048 493 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 ELOCQ15369 112 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 ALG11Q2TAA5 492 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 WSCD2Q2TBF2 565 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 LINC00303Q3SY05 128 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 KCTD16Q68DU8 428 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 SCYL2Q6P3W7 929 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 CLEC14AQ86T13 490 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 ZSCAN30Q86W11 494 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 SFTPA2Q8IWL1 248 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 ARL10Q8N8L6 244 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 GDAP1L1Q96MZ0 367 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 NCAPGQ9BPX3 1015 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 OSBPL1AQ9BXW6 950 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 EDEM3Q9BZQ6 932 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 TTYH3Q9C0H2 523 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 LRRN3Q9H3W5 708 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 MOSPD1Q9UJG1 213 aa12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 HEMK1Q9Y5R4 338 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 FLNBO75369 2602 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-205ENST00000548277 A8MX80 341 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 CREB3O43889 395 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 RASGRP1O95267 797 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 WISP1O95388 367 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 TNFP01375 233 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 ITGA2BP08514 1039 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 ALPIP09923 528 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 JMJD7P0C870 316 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 UCHL3P15374 230 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 BLKP51451 505 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 MAPK10P53779 464 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 SRP54P61011 504 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 DPCR1Q3MIW9 517 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 MANEALQ5VSG8 457 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 VASH2Q86V25 355 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 ZFAND4Q86XD8 727 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 GKN2Q86XP6 184 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 FAM114A1Q8IWE2 563 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 FSTL5Q8N475 847 aaPredicted RBP12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 WDR48Q8TAF3 677 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 FAM172AQ8WUF8 416 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 STRADBQ9C0K7 418 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 SUDS3Q9H7L9 328 aaPredicted RBP12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 MRPL40Q9NQ50 206 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 SAMSN1Q9NSI8 373 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 KLQ9UEF7 1012 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 DAAM1Q9Y4D1 1078 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 AHCTF1Q8WYP5 2266 aa12.07□□□□□ -0.48
TRAFD1-205ENST00000548277 SDK2Q58EX2 2172 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 ARHGAP6O43182 974 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 NOBOXO60393 691 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 LSM8O95777 96 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 HTR1BP28222 390 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 EPHB2P29323 1055 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 KLK7P49862 253 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 HDAC4P56524 1084 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 CYP4F2P78329 520 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 CYTH1Q15438 398 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 TMEM52BQ4KMG9 183 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 TAF8Q7Z7C8 310 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 SLFN11Q7Z7L1 901 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 PAF1Q8N7H5 531 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 PLA2G15Q8NCC3 412 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 FAM46DQ8NEK8 389 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 EPS8L1Q8TE68 723 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 JPH3Q8WXH2 748 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 HMCESQ96FZ2 354 aa12.06□□□□□ -0.48
TRAFD1-205ENST00000548277 LIN37Q96GY3 246 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms