RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 TPI1P60174 286 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 RPL7AP62424 266 aaKnown RBP20.58■□□□□ 0.89
SSH1-207ENST00000547862 PPARDQ03181 441 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 CT47A1Q5JQC4 288 aaPredicted RBP20.58■□□□□ 0.89
SSH1-207ENST00000547862 RD3Q7Z3Z2 195 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 PAF1Q8N7H5 531 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 KYQ8NBH2 561 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 ANKRD20A12PQ8NF67 263 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 TSACCQ96A04 125 aaPredicted RBP20.58■□□□□ 0.89
SSH1-207ENST00000547862 CELF6Q96J87 481 aaKnown RBP20.58■□□□□ 0.89
SSH1-207ENST00000547862 CCDC3Q9BQI4 270 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 BOCQ9BWV1 1114 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 CLPBQ9H078 707 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 CATSPERBQ9H7T0 1116 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 UBA2Q9UBT2 640 aaPredicted RBP20.58■□□□□ 0.89
SSH1-207ENST00000547862 FZD10Q9ULW2 581 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 MGAQ8IWI9 3026 aa20.58■□□□□ 0.88
SSH1-207ENST00000547862 A0A1W2PNU3 283 aaPredicted RBP20.57■□□□□ 0.88
SSH1-207ENST00000547862 TPP1O14773 563 aa20.57■□□□□ 0.88
SSH1-207ENST00000547862 DXOO77932 396 aaKnown RBP20.57■□□□□ 0.88
SSH1-207ENST00000547862 C6P13671 934 aa20.57■□□□□ 0.88
SSH1-207ENST00000547862 RBMS1P29558 406 aaKnown RBP20.57■□□□□ 0.88
SSH1-207ENST00000547862 ZNF143P52747 638 aaPredicted RBP20.57■□□□□ 0.88
SSH1-207ENST00000547862 ERVPABLB-1P60509 514 aa20.57■□□□□ 0.88
SSH1-207ENST00000547862 UBXN1Q04323 297 aa20.57■□□□□ 0.88
SSH1-207ENST00000547862 SERINC3Q13530 473 aa20.57■□□□□ 0.88
SSH1-207ENST00000547862 DCUN1D2Q6PH85 259 aa20.57■□□□□ 0.88
SSH1-207ENST00000547862 NYAP1Q6ZVC0 841 aa20.57■□□□□ 0.88
SSH1-207ENST00000547862 PCDH19Q8TAB3 1148 aa20.57■□□□□ 0.88
SSH1-207ENST00000547862 CASKIN2Q8WXE0 1202 aa20.57■□□□□ 0.88
SSH1-207ENST00000547862 KALRNO60229 2985 aa20.57■□□□□ 0.88
SSH1-207ENST00000547862 SIGLEC16A6NMB1 481 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 LGALS16A8MUM7 142 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 LMO7DNF2Z398 122 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 YY2O15391 372 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 CTSEP14091 401 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 YPEL5P62699 121 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 ELP6Q0PNE2 266 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 SPIDRQ14159 915 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 LRRC14Q15048 493 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 CYTH1Q15438 398 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 PARP15Q460N3 678 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 ESRP1Q6NXG1 681 aaKnown RBP20.56■□□□□ 0.88
SSH1-207ENST00000547862 DNAAF5Q86Y56 855 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 NAT6Q93015 286 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 AGPAT1Q99943 283 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 PCDH12Q9NPG4 1184 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 DKK3Q9UBP4 350 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 PADI4Q9UM07 663 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 DAAM1Q9Y4D1 1078 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 OR1A2Q9Y585 309 aa20.56■□□□□ 0.88
SSH1-207ENST00000547862 TMCO5BA8MYB1 307 aa20.55■□□□□ 0.88
SSH1-207ENST00000547862 J3KR12 359 aa20.55■□□□□ 0.88
SSH1-207ENST00000547862 TK2O00142 265 aa20.55■□□□□ 0.88
SSH1-207ENST00000547862 AGRPO00253 132 aa20.55■□□□□ 0.88
SSH1-207ENST00000547862 ATMINO43313 823 aaPredicted RBP20.55■□□□□ 0.88
SSH1-207ENST00000547862 DESP17661 470 aa20.55■□□□□ 0.88
SSH1-207ENST00000547862 YBEYP58557 167 aaPredicted RBP20.55■□□□□ 0.88
SSH1-207ENST00000547862 C1QBPQ07021 282 aaKnown RBP20.55■□□□□ 0.88
SSH1-207ENST00000547862 ALG11Q2TAA5 492 aa20.55■□□□□ 0.88
SSH1-207ENST00000547862 INO80DQ53TQ3 878 aaPredicted RBP20.55■□□□□ 0.88
SSH1-207ENST00000547862 ENPP7Q6UWV6 458 aa20.55■□□□□ 0.88
SSH1-207ENST00000547862 CNPY3Q9BT09 278 aa20.55■□□□□ 0.88
SSH1-207ENST00000547862 LMBRD1Q9NUN5 540 aa20.55■□□□□ 0.88
SSH1-207ENST00000547862 ATMQ13315 3056 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 TCRBV5S1A1TA0A578 114 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 FGF10O15520 208 aaPredicted RBP20.54■□□□□ 0.88
SSH1-207ENST00000547862 LZTS3O60299 673 aaPredicted RBP20.54■□□□□ 0.88
SSH1-207ENST00000547862 CDK11BP21127 795 aaKnown RBP20.54■□□□□ 0.88
SSH1-207ENST00000547862 UCNP55089 124 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 MYL5Q02045 173 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 OGDHQ02218 1023 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 WSCD2Q2TBF2 565 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 TMEM52BQ4KMG9 183 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 ERAP2Q6P179 960 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 PCSK4Q6UW60 755 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 ZNF843Q8N446 348 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 TPCN2Q8NHX9 752 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 CCDC74AQ96AQ1 378 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 SUV39H2Q9H5I1 410 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 DHX35Q9H5Z1 703 aaKnown RBP20.54■□□□□ 0.88
SSH1-207ENST00000547862 EPB41L5Q9HCM4 733 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 KLQ9UEF7 1012 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 AP4E1Q9UPM8 1137 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 MFHAS1Q9Y4C4 1052 aa20.54■□□□□ 0.88
SSH1-207ENST00000547862 TCEA3O75764 348 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 RASGRP1O95267 797 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 PSMA2P25787 234 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 HTR1BP28222 390 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 LIG3P49916 1009 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 BLKP51451 505 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 HK3P52790 923 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 PDX1P52945 283 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 CFHR1Q03591 330 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 NFATC4Q14934 902 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 ELOCQ15369 112 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 SASS6Q6UVJ0 657 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 ZSWIM9Q86XI8 627 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 CAMK1DQ8IU85 385 aa20.53■□□□□ 0.88
SSH1-207ENST00000547862 SDR16C5Q8N3Y7 309 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms