RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ESRP1Q6NXG1 681 aaKnown RBP13.54□□□□□ -0.24
PTCH1-215ENST00000547672 NCEH1Q6PIU2 408 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 TPGS1Q6ZTW0 290 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 PLPP6Q8IY26 295 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 EFHBQ8N7U6 833 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 C2CD4AQ8NCU7 369 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-215ENST00000547672 OR52K2Q8NGK3 314 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 GPR150Q8NGU9 434 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 VPS39Q96JC1 886 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 TUBGCP5Q96RT8 1024 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 BBS2Q9BXC9 721 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 SLC13A1Q9BZW2 595 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 ATP13A3Q9H7F0 1226 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 MANSC1Q9H8J5 431 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 THG1LQ9NWX6 298 aaKnown RBP13.54□□□□□ -0.24
PTCH1-215ENST00000547672 OBP2AQ9NY56 170 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 GDE1Q9NZC3 331 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 MARK1Q9P0L2 795 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 FBXO5Q9UKT4 447 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 STARD13Q9Y3M8 1113 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 RAI2Q9Y5P3 530 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 MIA3Q5JRA6 1907 aa13.54□□□□□ -0.24
PTCH1-215ENST00000547672 ERICH4A6NGS2 130 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 ANKRD66B4E2M5 251 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 KLF11O14901 512 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 MOSPD3O75425 235 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 RPP40O75818 363 aaKnown RBP13.53□□□□□ -0.24
PTCH1-215ENST00000547672 PIAS1O75925 651 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 ADH1CP00326 375 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 DHRS4L1P0CG22 281 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 LPOP22079 712 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-215ENST00000547672 CCR2P41597 374 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 CHRNA4P43681 627 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 GRIA4P48058 902 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 CD151P48509 253 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 CLCN5P51795 746 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 PRKAA2P54646 552 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 BCL2L1Q07817 233 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 ASPHQ12797 758 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 USP4Q13107 963 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 ITIH4Q14624 930 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 E2F5Q15329 346 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 ZNF77Q15935 545 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 FSCBQ5H9T9 825 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 ARMC12Q5T9G4 340 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 PPP2R2DQ66LE6 453 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 PIGWQ7Z7B1 504 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 ARID3BQ8IVW6 561 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-215ENST00000547672 LRRC34Q8IZ02 419 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 DCLK2Q8N568 766 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 PAF1Q8N7H5 531 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 OR6P1Q8NGX9 317 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 WFIKKN2Q8TEU8 576 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 ZNF75CPQ92670 426 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-215ENST00000547672 TCEAL4Q96EI5 215 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 SEC16BQ96JE7 1060 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 TRIB3Q96RU7 358 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 TTC1Q99614 292 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 GPR22Q99680 433 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 TDRD1Q9BXT4 1180 aaKnown RBP13.53□□□□□ -0.24
PTCH1-215ENST00000547672 MAGEE1Q9HCI5 957 aa13.53□□□□□ -0.24
PTCH1-215ENST00000547672 A0A087X1B8 175 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 GOLGA8CPA6NN73 597 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 GRXCR1A8MXD5 290 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 FOXO6A8MYZ6 492 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 TPP1O14773 563 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 PER2O15055 1255 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 MUSKO15146 869 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 LDB2O43679 373 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 SNAP91O60641 907 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 UGT1A9O60656 530 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 H2AFYO75367 372 aaKnown RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 POP4O95707 220 aaKnown RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 GSRP00390 522 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 ASLP04424 464 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 TAC1P20366 129 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 OGNP20774 298 aaKnown RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 GLDCP23378 1020 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 PSMA3P25788 255 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 SERPINA4P29622 427 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 LEPRP48357 1165 aaKnown RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 SERPINB4P48594 390 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 RGS19P49795 217 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 PTPN5P54829 565 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 POLR2LP62875 67 aaKnown RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 LMAN2Q12907 356 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 MSLNQ13421 630 aaPredicted RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 BMPR2Q13873 1038 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 USP10Q14694 798 aaKnown RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 TSNAXIP1Q2TAA8 658 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 PREPLQ4J6C6 727 aaPredicted RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 PITRM1Q5JRX3 1037 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 RBM23Q86U06 439 aaKnown RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 ZC3HC1Q86WB0 502 aaKnown RBP13.52□□□□□ -0.25
PTCH1-215ENST00000547672 NUDCD3Q8IVD9 361 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 UNC5BQ8IZJ1 945 aa13.52□□□□□ -0.25
PTCH1-215ENST00000547672 ADGRG2Q8IZP9 1017 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms