RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TMF1P82094 1093 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 TXNL4AP83876 142 aaKnown RBP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 E2F1Q01094 437 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 BYSLQ13895 437 aaKnown RBP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 IRF3Q14653 427 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 TTC31Q49AM3 519 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 C9orf152Q5JTZ5 239 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 GKAP1Q5VSY0 366 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 C11orf88Q6PI97 169 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 C16orf89Q6UX73 402 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 CCDC186Q7Z3E2 898 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 SLC46A3Q7Z3Q1 461 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 ADGRA1Q86SQ6 560 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 HSCBQ8IWL3 235 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 ARHGAP12Q8IWW6 846 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 UNC45BQ8IWX7 931 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 CARNMT1Q8N4J0 409 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 NRACQ8N912 160 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 OR6J1Q8NGC5 347 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 GDAP1Q8TB36 358 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 RMDN1Q96DB5 314 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 TBC1D31Q96DN5 1066 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 RAB3IPQ96QF0 476 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 FNBP1Q96RU3 617 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 ABHD1Q96SE0 405 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 TRIM31Q9BZY9 425 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 RXFP3Q9NSD7 469 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 PEMTQ9UBM1 199 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 CCNL1Q9UK58 526 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 MTMR6Q9Y217 621 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 RUSC2Q8N2Y8 1516 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 TARBP1Q13395 1621 aaKnown RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 hCG_1809904A0A1W2PP81 198 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 A0A1W2PPE2 198 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 A0A1W2PR64 198 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 PRR23D1E9PI22 279 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 M0QZQ0 153 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 LDLRAD4O15165 306 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 SLC7A4O43246 635 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 HTATSF1O43719 755 aaKnown RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 FGBP02675 491 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 CHRM4P08173 479 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 ABCB1P08183 1280 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 CCDC175P0C221 793 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 THEGLP0DJG4 465 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 PRR23D2P0DMB1 279 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 LYL1P12980 280 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 APEHP13798 732 aaKnown RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 ZNF8P17098 575 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 IFNAR1P17181 557 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 MATN1P21941 496 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 SP100P23497 879 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 ADRA1DP25100 572 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 PSMA3P25788 255 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 POU1F1P28069 291 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 LIG4P49917 911 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 HSD17B4P51659 736 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 MVDP53602 400 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 LINC00205P59089 165 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 SUMO2P61956 95 aaKnown RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 GSTA3Q16772 222 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 FAM187BQ17R55 369 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 ZNF667Q5HYK9 610 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 KRBOX4Q5JUW0 171 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 FAM171A1Q5VUB5 890 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 ADALQ6DHV7 355 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 GRHL2Q6ISB3 625 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 ACSM6Q6P461 480 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 TMEM88Q6PEY1 159 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 SLC30A9Q6PML9 568 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 CHST3Q7LGC8 479 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 GSTA5Q7RTV2 222 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 METTL23Q86XA0 190 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 LINC00346Q8IVM7 164 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 ENDOVQ8N8Q3 282 aaKnown RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 TERB1Q8NA31 727 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 ZBTB8BQ8NAP8 495 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 SMRP1Q8NCR6 262 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 OR52L2PQ8NGH6 319 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 NEK9Q8TD19 979 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 DEPDC1BQ8WUY9 529 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 SNX21Q969T3 373 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 SLC22A18Q96BI1 424 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 SIPA1Q96FS4 1042 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 TRMT61AQ96FX7 289 aaKnown RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 PGAM5Q96HS1 289 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 C1orf74Q96LT6 269 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 GCNAQ96QF7 691 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 NPAS1Q99742 590 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 CITED2Q99967 270 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 FAM118BQ9BPY3 351 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 CINPQ9BW66 212 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 SLC32A1Q9H598 525 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 FBRSL1Q9HCM7 1045 aaKnown RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 KLQ9UEF7 1012 aa4.44□□□□□ -1.7
SCAF11-210ENST00000547654 SEC63Q9UGP8 760 aaKnown RBP4.44□□□□□ -1.7
SCAF11-210ENST00000547654 MKLN1Q9UL63 735 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms