RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SLC25A23Q9BV35 468 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 DUSP16Q9BY84 665 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 RHOBTB2Q9BYZ6 727 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 NUF2Q9BZD4 464 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 UPF3AQ9H1J1 476 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 MRPL46Q9H2W6 279 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 PRDM12Q9H4Q4 367 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 PIF1Q9H611 641 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 CYP4F11Q9HBI6 524 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 CD320Q9NPF0 282 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 LATS2Q9NRM7 1088 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 PNPLA3Q9NST1 481 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 GPATCH2LQ9NWQ4 482 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SNTG2Q9NY99 539 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ZNHIT2Q9UHR6 403 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SLC8A2Q9UPR5 921 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 LZTS1Q9Y250 596 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 TMA7Q9Y2S6 64 aaKnown RBP6.54□□□□□ -1.36
SNHG1-225ENST00000545920 ACOT9Q9Y305 439 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 SNX9Q9Y5X1 595 aa6.54□□□□□ -1.36
SNHG1-225ENST00000545920 A0A087WXM4 84 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 A0A087WZ62 844 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 A0A0G2JLL6 359 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TMEM238LA0A1B0GVL6 79 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TCRBV3S1A0A5B6 114 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 HEATR9A2RTY3 570 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TYW5A2RUC4 315 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 CAPN8A6NHC0 703 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 AQP12BA6NM10 295 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TARM1B6A8C7 271 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 E9PBE3 544 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PIRO00625 290 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ACOT8O14734 319 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 VILLO15195 856 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 MFSD11O43934 449 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 KLHL41O60662 606 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 MMP20O60882 483 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 VPS4BO75351 444 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 GRAP2O75791 330 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PDE5AO76074 875 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 MAP3K6O95382 1288 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 H6PDO95479 791 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 RBP1P09455 135 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TXNP10599 105 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 FCGR1AP12314 374 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 INSRRP14616 1297 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 GOT1P17174 413 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PTPN3P26045 913 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ADORA2AP29274 412 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ADRA1BP35368 520 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 SOX18P35713 384 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 GNL1P36915 607 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 GRIA4P48058 902 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ALDH3B2P48448 385 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 MRPL19P49406 292 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TAF6P49848 677 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 SULT1E1P49888 294 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 THOP1P52888 689 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 NRLP54845 237 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ESRRGP62508 458 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 CCNA1P78396 465 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 FOXM1Q08050 763 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 BNIP2Q12982 314 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 GRIK2Q13002 908 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 SPIDRQ14159 915 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PTK2BQ14289 1009 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 LSM12Q3MHD2 195 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 SLC9B1Q4ZJI4 515 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 FBXO47Q5MNV8 452 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TCHHL1Q5QJ38 904 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 XP32Q5T750 250 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ACBD5Q5T8D3 534 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 INTS11Q5TA45 600 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 AGAP9Q5VTM2 703 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 C9orf57Q5W0N0 161 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 LPCAT4Q643R3 524 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ALKAL1Q6UXT8 129 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PRRT2Q7Z6L0 340 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ZC3HC1Q86WB0 502 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ERO1BQ86YB8 467 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 AQP12AQ8IXF9 295 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 RBM12BQ8IXT5 1001 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TMEM192Q8IY95 271 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TMEM86AQ8N2M4 240 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PGBD3Q8N328 593 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 CHCHD4Q8N4Q1 142 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 SLC25A41Q8N5S1 370 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ANKFN1Q8N957 763 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TMEM102Q8N9M5 508 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 DNAAF3Q8N9W5 541 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 MFSD2AQ8NA29 543 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PCYOX1LQ8NBM8 494 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 CCNYQ8ND76 341 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 APPL2Q8NEU8 664 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 OR6B3Q8NGW1 331 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 ZNF420Q8TAQ5 688 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 PIWIL1Q96J94 861 aaKnown RBP6.53□□□□□ -1.36
SNHG1-225ENST00000545920 MPP4Q96JB8 637 aa6.53□□□□□ -1.36
SNHG1-225ENST00000545920 TEKT5Q96M29 485 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms