RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 TEX33O43247 280 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 SRGAP2O75044 1071 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 RNASEH2AO75792 299 aaKnown RBP7.84□□□□□ -1.15
SNHG1-223ENST00000545440 IL1BP01584 269 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 IGHV4-34P06331 123 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 SRCP12931 536 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 VAV1P15498 845 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 GOT1P17174 413 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 DESP17661 470 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 RFC1P35251 1148 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-223ENST00000545440 ADRA1BP35368 520 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 DRD3P35462 400 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 ETFBP38117 255 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 PRKCIP41743 596 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 MAPKAPK2P49137 400 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 NUMBP49757 651 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 ZNF143P52747 638 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-223ENST00000545440 GALCP54803 685 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 AIF1P55008 147 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 TPM4P67936 248 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 SHC2P98077 582 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 HNRNPDQ14103 355 aaKnown RBP7.84□□□□□ -1.15
SNHG1-223ENST00000545440 DLG2Q15700 870 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 FIGNQ5HY92 759 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 N4BP2L1Q5TBK1 243 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-223ENST00000545440 FAM46CQ5VWP2 391 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 C22orf39Q6P5X5 142 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 NCEH1Q6PIU2 408 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 LRFN4Q6PJG9 635 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 IRF2BP2Q7Z5L9 587 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 PIP4P1Q86T03 277 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 OR2T34Q8NGX1 318 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 FBXO27Q8NI29 283 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 GANCQ8TET4 914 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 FAM172AQ8WUF8 416 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 VCPIP1Q96JH7 1222 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 MCEEQ96PE7 176 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 ORAI3Q9BRQ5 295 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 EDEM3Q9BZQ6 932 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 OSBPL2Q9H1P3 480 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 AIPL1Q9NZN9 384 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 OR12D3Q9UGF7 316 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 NEU3Q9UQ49 428 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 ZFC3H1O60293 1989 aaKnown RBP7.83□□□□□ -1.16
SNHG1-223ENST00000545440 A0A1W2PPC4 97 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 CCP110O43303 1012 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 LATO43561 262 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 PLRG1O43660 514 aaKnown RBP7.83□□□□□ -1.16
SNHG1-223ENST00000545440 SNAP91O60641 907 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 LRIG2O94898 1065 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 FSBPO95073 299 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 GJB6O95452 261 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 SERPINC1P01008 464 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 PGRP06401 933 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 CTSBP07858 339 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 CD59P13987 128 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 RRM1P23921 792 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 NUDT1P36639 197 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 SERPINH1P50454 418 aaKnown RBP7.83□□□□□ -1.16
SNHG1-223ENST00000545440 CCR5P51681 352 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 GEMIN4P57678 1058 aaKnown RBP7.83□□□□□ -1.16
SNHG1-223ENST00000545440 ARF5P84085 180 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 GNA12Q03113 381 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 ASIC2Q16515 512 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 ACCSLQ4AC99 568 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 RAB6CQ53S08 254 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 AGBL4Q5VU57 503 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 SFMBT2Q5VUG0 894 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 ACAD10Q6JQN1 1059 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 RETSATQ6NUM9 610 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 WDR59Q6PJI9 974 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 PHLDB2Q86SQ0 1253 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 NLRP14Q86W24 1093 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 MCOLN2Q8IZK6 566 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 CCDC185Q8N715 623 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 ATP11CQ8NB49 1132 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 DEFB124Q8NES8 71 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 OR7D4Q8NG98 312 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 OR2I1PQ8NGU4 316 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 PIP4K2CQ8TBX8 421 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 ANAPC16Q96DE5 110 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 TBC1D31Q96DN5 1066 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 IQCDQ96DY2 449 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 WDR89Q96FK6 387 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-223ENST00000545440 CNPY3Q9BT09 278 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 RAB6CQ9H0N0 254 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 NEUROG2Q9H2A3 272 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 ATP13A1Q9HD20 1204 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 TM9SF3Q9HD45 589 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 TMEM248Q9NWD8 314 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 ADAM30Q9UKF2 790 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 ANGPTL2Q9UKU9 493 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 SLCO1B1Q9Y6L6 691 aa7.83□□□□□ -1.16
SNHG1-223ENST00000545440 A0A1B0GVT2 93 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 FAM47DPA6NHR8 397 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 EIF3CLB5ME19 914 aaKnown RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 CBX4O00257 560 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 VILLO15195 856 aa7.82□□□□□ -1.16
SNHG1-223ENST00000545440 SMAD6O43541 496 aaKnown RBP7.82□□□□□ -1.16
SNHG1-223ENST00000545440 RAMP2O60895 175 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms