RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 IL22RA1Q8N6P7 574 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 FUBP1Q96AE4 644 aaKnown RBP9.5□□□□□ -0.89
CHD4-212ENST00000545083 RBM15Q96T37 977 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD4-212ENST00000545083 NUDT22Q9BRQ3 303 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 WRAP53Q9BUR4 548 aaKnown RBP9.5□□□□□ -0.89
CHD4-212ENST00000545083 LRIT1Q9P2V4 623 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 OR1A2Q9Y585 309 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 B3GALT1Q9Y5Z6 326 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 CELSR2Q9HCU4 2923 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 LRP4O75096 1905 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 ZNF891A8MT65 544 aaPredicted RBP9.49□□□□□ -0.89
CHD4-212ENST00000545083 B4DGG1 531 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 K7ELQ4 463 aaPredicted RBP9.49□□□□□ -0.89
CHD4-212ENST00000545083 K7EM74 188 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 KRIT1O00522 736 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 TOR1BO14657 336 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 RAD1O60671 282 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 ERBB2P04626 1255 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 PRKAR1AP10644 381 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 PEX5P50542 639 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 OR1D5P58170 312 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 GNA12Q03113 381 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 MTA1Q13330 715 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 ARHGEF7Q14155 803 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 INPP5AQ14642 412 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 NFATC4Q14934 902 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 AMZ1Q400G9 498 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 C14orf28Q4W4Y0 310 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 EFHC1Q5JVL4 640 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 ATXN7L2Q5T6C5 722 aaPredicted RBP9.49□□□□□ -0.89
CHD4-212ENST00000545083 ATL3Q6DD88 541 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 FOXR2Q6PJQ5 311 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 LEKR1Q6ZMV7 388 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 TTC7BQ86TV6 843 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 PASD1Q8IV76 773 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 PLPP6Q8IY26 295 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 EHBP1Q8NDI1 1231 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 FAM46DQ8NEK8 389 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 CCL4L1Q8NHW4 92 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 CXorf40AQ8TE69 158 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 OR1E3Q8WZA6 343 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 ISG20Q96AZ6 181 aaKnown RBP9.49□□□□□ -0.89
CHD4-212ENST00000545083 ARHGEF26Q96DR7 871 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 SLC45A3Q96JT2 553 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 CATSPER2Q96P56 530 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 TAAR9Q96RI9 348 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 NPY6RQ99463 290 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 APOOQ9BUR5 198 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 C1QTNF7Q9BXJ2 289 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 CDH19Q9H159 772 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 GOLPH3LQ9H4A5 285 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 WDCPQ9H6R7 721 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 NDFIP2Q9NV92 336 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 KLQ9UEF7 1012 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 CFAP45Q9UL16 551 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 PCDHGA3Q9Y5H0 932 aa9.49□□□□□ -0.89
CHD4-212ENST00000545083 C2CD3Q4AC94 2353 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 IGHV5-10-1A0A0J9YXX1 117 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 TMEM202A6NGA9 273 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 PRR19A6NJB7 356 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 TMEM110-MUSTN1A8MSY1 372 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 MED7O43513 233 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 NUDT21O43809 227 aaKnown RBP9.48□□□□□ -0.89
CHD4-212ENST00000545083 SRGAP2O75044 1071 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 AGFG2O95081 481 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 CPNE6O95741 557 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 GSRP00390 522 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 KRT7P08729 469 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 TIMP2P16035 220 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 HTR1BP28222 390 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 OAS2P29728 719 aaKnown RBP9.48□□□□□ -0.89
CHD4-212ENST00000545083 GNA15P30679 374 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 SULT1E1P49888 294 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 MAZP56270 477 aaKnown RBP9.48□□□□□ -0.89
CHD4-212ENST00000545083 LRRC14Q15048 493 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 MYLK3Q32MK0 819 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 LACTB2Q53H82 288 aaPredicted RBP9.48□□□□□ -0.89
CHD4-212ENST00000545083 BRMS1LQ5PSV4 323 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 ATP1A1-AS1Q5TC04 95 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 LRRC31Q6UY01 552 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 ZNF783Q6ZMS7 281 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 C11orf57Q6ZUT1 292 aaPredicted RBP9.48□□□□□ -0.89
CHD4-212ENST00000545083 SLC26A9Q7LBE3 791 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 TAF8Q7Z7C8 310 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 PIM3Q86V86 326 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 ATCAYQ86WG3 371 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 DRC7Q8IY82 874 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 UNC5BQ8IZJ1 945 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 NETO2Q8NC67 525 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 OR2AP1Q8NGE2 309 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 GPBAR1Q8TDU6 330 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 ARHGEF2Q92974 986 aaKnown RBP9.48□□□□□ -0.89
CHD4-212ENST00000545083 ART4Q93070 314 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 CCDC74BQ96LY2 380 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 WDR92Q96MX6 357 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 TSG101Q99816 390 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 GTPBP4Q9BZE4 634 aaKnown RBP9.48□□□□□ -0.89
CHD4-212ENST00000545083 TMEM168Q9H0V1 697 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 FGF22Q9HCT0 170 aa9.48□□□□□ -0.89
CHD4-212ENST00000545083 MRPL40Q9NQ50 206 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms