RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 DEFB123Q8N688 67 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 NAT16Q8N8M0 369 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 ZNF398Q8TD17 642 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 DENND1AQ8TEH3 1009 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 FRS2Q8WU20 508 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 SORCS1Q8WY21 1168 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 ATP2A3Q93084 1043 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 SIGLEC10Q96LC7 697 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 TRIB3Q96RU7 358 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 SLC2A11Q9BYW1 496 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 VPS11Q9H270 941 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 NOD2Q9HC29 1040 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 NT5MQ9NPB1 228 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 CASS4Q9NQ75 786 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 PIH1D1Q9NWS0 290 aaKnown RBP7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 UBP1Q9NZI7 540 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 KIAA1522Q9P206 1035 aaPredicted RBP7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 UBA2Q9UBT2 640 aaPredicted RBP7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 TBK1Q9UHD2 729 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 ZNF180Q9UJW8 692 aa7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 FCF1Q9Y324 198 aaKnown RBP7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 TCF20Q9UGU0 1960 aaKnown RBP7.08□□□□□ -1.28
HMGCS2-204ENST00000544913 PRRT4C9JH25 899 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 INSIG1O15503 277 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 STK10O94804 968 aaKnown RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 NFATC1O95644 943 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 ADH1CP00326 375 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 CYBBP04839 570 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 ATXN1LP0C7T5 689 aaKnown RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 MLNP12872 115 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SRCP12931 536 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 FOSL2P15408 326 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 GCAP28676 217 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 GJA4P35212 333 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SKIV2L2P42285 1042 aaKnown RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 CHRNA4P43681 627 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SCTRP47872 440 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SLC12A1Q13621 1099 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 RUNX3Q13761 415 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 RFTN1Q14699 578 aaPredicted RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SMAD2Q15796 467 aaKnown RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 PDK4Q16654 411 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 AAK1Q2M2I8 961 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 LEXMQ3ZCV2 418 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 HHATQ5VTY9 493 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 ITPRIPL1Q6GPH6 555 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SPATA21Q7Z572 469 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SUGP1Q8IWZ8 645 aaKnown RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 CYP4X1Q8N118 509 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 ANKRD42Q8N9B4 389 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 FBXO36Q8NEA4 188 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 LRRC8CQ8TDW0 803 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 ACDQ96AP0 544 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 E2F7Q96AV8 911 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 MTBPQ96DY7 904 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 EXOC2Q96KP1 924 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 TUBB6Q9BUF5 446 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 C2orf49Q9BVC5 232 aaPredicted RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 YY1AP1Q9H869 796 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 FBRSL1Q9HCM7 1045 aaKnown RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 XAB2Q9HCS7 855 aaKnown RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 PRDM6Q9NQX0 595 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 CTNNAL1Q9UBT7 734 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SEPT3Q9UH03 358 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SLCO3A1Q9UIG8 710 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 TEX264Q9Y6I9 313 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 MYO10Q9HD67 2058 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 LOC285095A0A1B0GVY8 99 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 TYW5A2RUC4 315 aaKnown RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 TYROBPO43914 113 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 DCTN3O75935 186 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 KRT37O76014 449 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 INHBAP08476 426 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 TAC1P20366 129 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 CA4P22748 312 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 CNTFP26441 200 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 GDI1P31150 447 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 CD86P42081 329 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SOX9P48436 509 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 WNT3AP56704 352 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 DNAJC3Q13217 504 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SETDB1Q15047 1291 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 BBS9Q3SYG4 887 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 ATXN7L2Q5T6C5 722 aaPredicted RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 MBLAC2Q68D91 279 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 LRRC8BQ6P9F7 803 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 TXNDC11Q6PKC3 985 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 RNF135Q8IUD6 432 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 TRIM42Q8IWZ5 723 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 OR52K1Q8NGK4 314 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 TTC8Q8TAM2 541 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 MAGEC3Q8TD91 643 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 FBF1Q8TES7 1133 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 RPL10LQ96L21 214 aaKnown RBP7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SMIM14Q96QK8 99 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 PAFAH2Q99487 392 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 SEMA3CQ99985 751 aa7.07□□□□□ -1.28
HMGCS2-204ENST00000544913 APOL2Q9BQE5 337 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms