RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 AP1S1P61966 158 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 KRT81Q14533 505 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 TCEAL1Q15170 157 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 MAP7D3Q8IWC1 876 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 TP53INP2Q8IXH6 220 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 SLC22A18ASQ8N1D0 253 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 CXorf40AQ8TE69 158 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 ECHDC3Q96DC8 303 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 INTUQ9ULD6 942 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 COL5A1P20908 1838 aaPredicted RBP14.05□□□□□ -0.16
VAMP1-208ENST00000544432 SPEGQ15772 3267 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 AKAP13Q12802 2813 aa14.05□□□□□ -0.16
VAMP1-208ENST00000544432 ARID1BQ8NFD5 2236 aaPredicted RBP14.05□□□□□ -0.16
VAMP1-208ENST00000544432 SPTY2D1-AS1A0A0U1RR47 76 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 A0A1W2PQ67 120 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 TMEM8BA6NDV4 472 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 TRAFD1O14545 582 aaPredicted RBP14.04□□□□□ -0.16
VAMP1-208ENST00000544432 RIOK3O14730 519 aaKnown RBP14.04□□□□□ -0.16
VAMP1-208ENST00000544432 MMP20O60882 483 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 SSR1P43307 286 aaKnown RBP14.04□□□□□ -0.16
VAMP1-208ENST00000544432 PFN3P60673 137 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 YPEL5P62699 121 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 POLR2LP62875 67 aaKnown RBP14.04□□□□□ -0.16
VAMP1-208ENST00000544432 BCL2L1Q07817 233 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 SLC10A7Q0GE19 358 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 PAFAH1B3Q15102 231 aaKnown RBP14.04□□□□□ -0.16
VAMP1-208ENST00000544432 AGERQ15109 404 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 RALGPS1Q5JS13 557 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 ERAP2Q6P179 960 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 UNQ6494/PRO21346Q6UXR6 183 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 TMPRSS7Q7RTY8 843 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 CAMK1DQ8IU85 385 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 BBS5Q8N3I7 341 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 EID2Q8N6I1 236 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 PNPLA1Q8N8W4 532 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 KDF1Q8NAX2 398 aaPredicted RBP14.04□□□□□ -0.16
VAMP1-208ENST00000544432 SLC35G2Q8TBE7 412 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 CNDP2Q96KP4 475 aaKnown RBP14.04□□□□□ -0.16
VAMP1-208ENST00000544432 ZNF670Q9BS34 389 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 CALN1Q9BXU9 219 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 PCDH12Q9NPG4 1184 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 KLK13Q9UKR3 277 aa14.04□□□□□ -0.16
VAMP1-208ENST00000544432 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.03□□□□□ -0.16
VAMP1-208ENST00000544432 ZNF487B1APH4 448 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 ENC1O14682 589 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 MUSKO15146 869 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 CD48P09326 243 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 ITIH2P19823 946 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 CR2P20023 1033 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 DGKAP23743 735 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 SCNN1BP51168 640 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 TAS2R40P59535 323 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 HNRNPKP61978 463 aaKnown RBP eCLIP14.03□□□□□ -0.16
VAMP1-208ENST00000544432 MMRN1Q13201 1228 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 ZNF211Q13398 564 aaPredicted RBP14.03□□□□□ -0.16
VAMP1-208ENST00000544432 ILKQ13418 452 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 DPYSL3Q14195 570 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 FZD2Q14332 565 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 ATP13A4Q4VNC1 1196 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 CFAP58Q5T655 872 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 CCNI2Q6ZMN8 369 aaPredicted RBP14.03□□□□□ -0.16
VAMP1-208ENST00000544432 PTAR1Q7Z6K3 402 aaPredicted RBP14.03□□□□□ -0.16
VAMP1-208ENST00000544432 PARGQ86W56 976 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 ZSWIM9Q86XI8 627 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 VSIG1Q86XK7 387 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 RHOT2Q8IXI1 618 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 GALNT15Q8N3T1 639 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 SLC25A45Q8N413 288 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 ATPAF2Q8N5M1 289 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 TEX26Q8N6G2 289 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 KCTD6Q8NC69 237 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 NSMCE1Q8WV22 266 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 FATE1Q969F0 183 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 FAF2Q96CS3 445 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 NUDCD1Q96RS6 583 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 MGME1Q9BQP7 344 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 TRIM5Q9C035 493 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 ATP8A1Q9Y2Q0 1164 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 TP53BP1Q12888 1972 aaPredicted RBP14.03□□□□□ -0.16
VAMP1-208ENST00000544432 USP24Q9UPU5 2620 aa14.03□□□□□ -0.16
VAMP1-208ENST00000544432 KMT2BQ9UMN6 2715 aaPredicted RBP14.02□□□□□ -0.16
VAMP1-208ENST00000544432 KNTC1P50748 2209 aa14.02□□□□□ -0.16
VAMP1-208ENST00000544432 C1QTNF9BB2RNN3 333 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 HTRA2O43464 458 aaPredicted RBP14.02□□□□□ -0.17
VAMP1-208ENST00000544432 SOCS5O75159 536 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 PIAS2O75928 621 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 CSF2P04141 144 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 C1QTNF9P0C862 333 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 NME1P15531 152 aaKnown RBP14.02□□□□□ -0.17
VAMP1-208ENST00000544432 MMP12P39900 470 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 PEX5P50542 639 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 GALNT2Q10471 571 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 PTK2BQ14289 1009 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 ZNF235Q14590 738 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 SMAD1Q15797 465 aaKnown RBP14.02□□□□□ -0.17
VAMP1-208ENST00000544432 PROX2Q3B8N5 592 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 ANKRD20A8PQ5CZ79 823 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 LRRC73Q5JTD7 316 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 MARC1Q5VT66 337 aa14.02□□□□□ -0.17
VAMP1-208ENST00000544432 PGBD5Q8N414 524 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms