RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 UGP2Q16851 508 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 ZSCAN30Q86W11 494 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 HORMAD1Q86X24 394 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 RGL4Q8IZJ4 473 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 TRIM58Q8NG06 486 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 TM9SF3Q9HD45 589 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 RXFP3Q9NSD7 469 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 GGT7Q9UJ14 662 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.3■□□□□ 0.68
DDX55-211ENST00000544429 A0A1W2PQU0 124 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 UPK3BL1B0FP48 263 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 UPK3BL2E5RIL1 263 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 KHNYNO15037 678 aaKnown RBP19.29■□□□□ 0.68
DDX55-211ENST00000544429 BCAT2O15382 392 aaPredicted RBP19.29■□□□□ 0.68
DDX55-211ENST00000544429 TSPAN6O43657 245 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 FZD6O60353 706 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 RNGTTO60942 597 aaKnown RBP19.29■□□□□ 0.68
DDX55-211ENST00000544429 JCHAINP01591 159 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 GNSP15586 552 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 NIPAL4Q0D2K0 466 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 AP1B1Q10567 949 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 WASHC5Q12768 1159 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 TRAF2Q12933 501 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 ZNF211Q13398 564 aaPredicted RBP19.29■□□□□ 0.68
DDX55-211ENST00000544429 TRIM61Q5EBN2 209 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 KIAA1161Q6NSJ0 714 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 TTC7BQ86TV6 843 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 KIAA2013Q8IYS2 634 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 ZCCHC9Q8N567 271 aaKnown RBP19.29■□□□□ 0.68
DDX55-211ENST00000544429 TFB1MQ8WVM0 346 aaKnown RBP19.29■□□□□ 0.68
DDX55-211ENST00000544429 TADA1Q96BN2 335 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 QKIQ96PU8 341 aaKnown RBP eCLIP19.29■□□□□ 0.68
DDX55-211ENST00000544429 SEMA3CQ99985 751 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 SCUBE2Q9NQ36 999 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 SLC6A14Q9UN76 642 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 DMTF1Q9Y222 760 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 ITM2BQ9Y287 266 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 PCDHGC4Q9Y5F7 938 aa19.29■□□□□ 0.68
DDX55-211ENST00000544429 HACD1B0YJ81 288 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 PRR5-ARHGAP8B1AHC4 643 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 TJP3O95049 919 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 MMP2P08253 660 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 CETN2P41208 172 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 RPS21P63220 83 aaKnown RBP19.28■□□□□ 0.68
DDX55-211ENST00000544429 RACK1P63244 317 aaKnown RBP19.28■□□□□ 0.68
DDX55-211ENST00000544429 DSC2Q02487 901 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 FGL2Q14314 439 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 TMEM52BQ4KMG9 183 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 TEX44Q53QW1 395 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 SEL1L3Q68CR1 1132 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 TMEM145Q8NBT3 493 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 ACTL9Q8TC94 416 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 ASB12Q8WXK4 309 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 SNX19Q92543 992 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 ALS2CR12Q96Q35 445 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 C1QTNF2Q9BXJ5 285 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 TLR10Q9BXR5 811 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 PPIL1Q9Y3C6 166 aa19.28■□□□□ 0.68
DDX55-211ENST00000544429 A0A1W2PQ67 120 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 A0A1W2PR77 199 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 RIOK3O14730 519 aaKnown RBP19.27■□□□□ 0.68
DDX55-211ENST00000544429 WNT9AO14904 365 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 MTSS1O43312 755 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 PTMAP06454 111 aaKnown RBP19.27■□□□□ 0.68
DDX55-211ENST00000544429 ITIH2P19823 946 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 PTPN3P26045 913 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 MMP12P39900 470 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 GRIA4P48058 902 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 AFF3P51826 1226 aaKnown RBP19.27■□□□□ 0.68
DDX55-211ENST00000544429 OTUD4Q01804 1114 aaKnown RBP19.27■□□□□ 0.68
DDX55-211ENST00000544429 BNC1Q01954 994 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 LMNB2Q03252 620 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 SETMARQ53H47 684 aaPredicted RBP19.27■□□□□ 0.68
DDX55-211ENST00000544429 SLC45A4Q5BKX6 768 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 LRRC73Q5JTD7 316 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 B4GALNT4Q76KP1 1039 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 PRPF39Q86UA1 669 aaKnown RBP19.27■□□□□ 0.68
DDX55-211ENST00000544429 HAUS1Q96CS2 278 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 FEM1CQ96JP0 617 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 TEKT5Q96M29 485 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 MIR1-1HGQ9H1L0 117 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 CARD9Q9H257 536 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 PCDH12Q9NPG4 1184 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 HAUS2Q9NVX0 235 aa19.27■□□□□ 0.68
DDX55-211ENST00000544429 TMEM131Q92545 1883 aa19.26■□□□□ 0.67
DDX55-211ENST00000544429 PCDH8O95206 1070 aa19.26■□□□□ 0.67
DDX55-211ENST00000544429 PGLSO95336 258 aa19.26■□□□□ 0.67
DDX55-211ENST00000544429 PRLP01236 227 aa19.26■□□□□ 0.67
DDX55-211ENST00000544429 MAT2AP31153 395 aaKnown RBP19.26■□□□□ 0.67
DDX55-211ENST00000544429 LIMK1P53667 647 aa19.26■□□□□ 0.67
DDX55-211ENST00000544429 POLR2LP62875 67 aaKnown RBP19.26■□□□□ 0.67
DDX55-211ENST00000544429 ELP6Q0PNE2 266 aa19.26■□□□□ 0.67
DDX55-211ENST00000544429 SLC14A2Q15849 920 aa19.26■□□□□ 0.67
DDX55-211ENST00000544429 NAPEPLDQ6IQ20 393 aa19.26■□□□□ 0.67
DDX55-211ENST00000544429 ZC3H18Q86VM9 953 aaKnown RBP19.26■□□□□ 0.67
DDX55-211ENST00000544429 IMP4Q96G21 291 aaKnown RBP19.26■□□□□ 0.67
DDX55-211ENST00000544429 SLC6A18Q96N87 628 aa19.26■□□□□ 0.67
DDX55-211ENST00000544429 NUSAP1Q9BXS6 441 aaKnown RBP19.26■□□□□ 0.67
DDX55-211ENST00000544429 TDRD1Q9BXT4 1180 aaKnown RBP19.26■□□□□ 0.67
DDX55-211ENST00000544429 TCRBV7S2A1N4TA0A589 114 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms