RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TXNDC9O14530 226 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 DENRO43583 198 aaKnown RBP15.14■□□□□ 0.01
CHFR-223ENST00000544268 TRMUO75648 421 aaKnown RBP15.14■□□□□ 0.01
CHFR-223ENST00000544268 PDE5AO76074 875 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 MLNP12872 115 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 ALDH7A1P49419 539 aaKnown RBP15.14■□□□□ 0.01
CHFR-223ENST00000544268 ARPP19P56211 112 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 SEMA3BQ13214 749 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 MYLK3Q32MK0 819 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 FBXL19Q6PCT2 694 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 SCN4BQ8IWT1 228 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 PHTF2Q8N3S3 785 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 SPATA6LQ8N4H0 392 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 ICA1LQ8NDH6 482 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 PIWIL2Q8TC59 973 aaKnown RBP15.14■□□□□ 0.01
CHFR-223ENST00000544268 PYDC1Q8WXC3 89 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 CDKL2Q92772 493 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 HSPBAP1Q96EW2 488 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 COPG2Q9UBF2 871 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 PACSIN3Q9UKS6 424 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 LOC100653049A0A140TA62 436 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 TMEM247A6NEH6 219 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.14■□□□□ 0.01
CHFR-223ENST00000544268 KRT34O76011 436 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 STK10O94804 968 aaKnown RBP15.14■□□□□ 0.01
CHFR-223ENST00000544268 LRIG2O94898 1065 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 JCHAINP01591 159 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 POLBP06746 335 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 NMBRP28336 390 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 SLC5A3P53794 718 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 MTTPP55157 894 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 ZNF460Q14592 562 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 TBCCQ15814 346 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 PM20D1Q6GTS8 502 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 SLC15A3Q8IY34 581 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 TTC9BQ8N6N2 239 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 ATAD1Q8NBU5 361 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 SIK2Q9H0K1 926 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 PFDN4Q9NQP4 134 aa15.14■□□□□ 0.01
CHFR-223ENST00000544268 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 A0A088AWK7 358 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 BOLA2-SMG1P6H3BVE0 249 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 TNFRSF10BO14763 440 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 GLRA3O75311 464 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 MT-CYBP00156 380 aaPredicted RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 PEX2P28328 305 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 HOXD12P35452 270 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 AVPR1AP37288 418 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 GPR15P49685 360 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 IDH3AP50213 366 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 WDR5P61964 334 aaKnown RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 ELAVL2Q12926 359 aaKnown RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 NFE2Q16621 373 aaPredicted RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 RABGAP1LQ5R372 815 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 SDHAF4Q5VUM1 108 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 GRAMD4Q6IC98 578 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 ZNF781Q8N8C0 355 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 MAPK15Q8TD08 544 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 IARS2Q9NSE4 1012 aaKnown RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 NDFIP2Q9NV92 336 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 IGSF9Q9P2J2 1179 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 TXNDC16Q9P2K2 825 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 RCOR3Q9P2K3 495 aaPredicted RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 OR12D3Q9UGF7 316 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 FBXW11Q9UKB1 542 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 OR6C75A6NL08 312 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 EIF3FO00303 357 aaPredicted RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 ZNF195O14628 629 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 CASQ2O14958 399 aaPredicted RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 AP2A1O95782 977 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 PCSK6P29122 969 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 SLC5A2P31639 672 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 CPOXP36551 454 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 GLRBP48167 497 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 ACADVLP49748 655 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 COG7P83436 770 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 DDR2Q16832 855 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 PRSS55Q6UWB4 352 aaPredicted RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 TMC7Q7Z402 723 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 PSTKQ8IV42 348 aaKnown RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 CNTD1Q8N815 330 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 DDI1Q8WTU0 396 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 ABHD8Q96I13 439 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 TTPALQ9BTX7 342 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 VN1R3Q9BXE9 311 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 CYP4F11Q9HBI6 524 aa15.13■□□□□ 0.01
CHFR-223ENST00000544268 EIF2B3Q9NR50 452 aaKnown RBP15.13■□□□□ 0.01
CHFR-223ENST00000544268 SH3PXD2BA1X283 911 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 PHGDHO43175 533 aaKnown RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 TBC1D4O60343 1298 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 SIN3BO75182 1162 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 CHRNGP07510 517 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 SERPINA6P08185 405 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 RALBP11234 206 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 CPB1P15086 417 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 EN2P19622 333 aaPredicted RBP15.12■□□□□ 0.01
CHFR-223ENST00000544268 GP5P40197 560 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 SPIDRQ14159 915 aa15.12■□□□□ 0.01
CHFR-223ENST00000544268 CLPPQ16740 277 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms