RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 LPCAT1Q8NF37 534 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 CEP295NLQ96MC4 621 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 ACE2Q9BYF1 805 aaPredicted RBP13.8□□□□□ -0.2
HCFC2-202ENST00000544223 COL6A3P12111 3177 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 LOC285095A0A1B0GVY8 99 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 LDB2O43679 373 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 LUC7L3O95232 432 aaKnown RBP13.79□□□□□ -0.2
HCFC2-202ENST00000544223 SERPINF2P08697 491 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 DHRS4L1P0CG22 281 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 ABL2P42684 1182 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 LIG3P49916 1009 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 CDKN1CP49918 316 aaPredicted RBP13.79□□□□□ -0.2
HCFC2-202ENST00000544223 LIMK2P53671 638 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 ASTLQ6HA08 431 aaPredicted RBP13.79□□□□□ -0.2
HCFC2-202ENST00000544223 TMC5Q6UXY8 1006 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 CCDC149Q6ZUS6 474 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 RAPH1Q70E73 1250 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 CYS1Q717R9 158 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 ZC3HC1Q86WB0 502 aaKnown RBP13.79□□□□□ -0.2
HCFC2-202ENST00000544223 ELMOD1Q8N336 334 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 CRYL1Q9Y2S2 319 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 YBX2Q9Y2T7 364 aaKnown RBP13.79□□□□□ -0.2
HCFC2-202ENST00000544223 USP15Q9Y4E8 981 aaPredicted RBP13.79□□□□□ -0.2
HCFC2-202ENST00000544223 A0A096LPK6 155 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 TRAV19A0A0A6YYK7 116 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 MAGEB16A2A368 324 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 EDF1O60869 148 aaKnown RBP13.79□□□□□ -0.2
HCFC2-202ENST00000544223 ZMPSTE24O75844 475 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 PRLP01236 227 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 CTPS1P17812 591 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 CCNFP41002 786 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 SERPINB9P50453 376 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 SEMA3AQ14563 771 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 EML3Q32P44 896 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 SRLQ86TD4 932 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 MDGA1Q8NFP4 955 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 ITFG1Q8TB96 612 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 USP13Q92995 863 aaPredicted RBP13.79□□□□□ -0.2
HCFC2-202ENST00000544223 PSKH2Q96QS6 385 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 MGME1Q9BQP7 344 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 FAM96AQ9H5X1 160 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 TLE6Q9H808 572 aa13.79□□□□□ -0.2
HCFC2-202ENST00000544223 SSU72Q9NP77 194 aaKnown RBP13.79□□□□□ -0.2
HCFC2-202ENST00000544223 INTS6Q9UL03 887 aaKnown RBP13.79□□□□□ -0.2
HCFC2-202ENST00000544223 SRRM3A6NNA2 597 aaPredicted RBP13.78□□□□□ -0.2
HCFC2-202ENST00000544223 NEDD8-MDP1E9PL57 170 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 PSMD3O43242 534 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 PIGNO95427 931 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 C2P06681 752 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 ARRB2P32121 409 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 CCR10P46092 362 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 LMAN2Q12907 356 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 THOC5Q13769 683 aaKnown RBP13.78□□□□□ -0.2
HCFC2-202ENST00000544223 LRRC73Q5JTD7 316 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 TSTD2Q5T7W7 516 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 GRTP1Q5TC63 336 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 PDPK2PQ6A1A2 396 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 CAMK1DQ8IU85 385 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 TADA1Q96BN2 335 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 ALKBH8Q96BT7 664 aaKnown RBP13.78□□□□□ -0.2
HCFC2-202ENST00000544223 MTBPQ96DY7 904 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 ALG14Q96F25 216 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 LRRC3BQ96PB8 259 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 MCMBPQ9BTE3 642 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 ABCB8Q9NUT2 735 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 DONSONQ9NYP3 566 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 SEPT3Q9UH03 358 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 OR51B4Q9Y5P0 310 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 WNT6Q9Y6F9 365 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 ANKRD12Q6UB98 2062 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 A0A0G2JND7 137 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 ITM2AO43736 263 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 CLASP2O75122 1294 aaKnown RBP13.78□□□□□ -0.2
HCFC2-202ENST00000544223 ALPIP09923 528 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 CRHR1P34998 444 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 SPRP35270 261 aaPredicted RBP13.78□□□□□ -0.2
HCFC2-202ENST00000544223 PPP3CCP48454 512 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 SLC18A1P54219 525 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 BST1Q10588 318 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 TRAF2Q12933 501 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 USP10Q14694 798 aaKnown RBP13.78□□□□□ -0.2
HCFC2-202ENST00000544223 TRIM68Q6AZZ1 485 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 NEPROQ6NW34 567 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 FAM43BQ6ZT52 329 aaPredicted RBP13.78□□□□□ -0.2
HCFC2-202ENST00000544223 SETD3Q86TU7 594 aaPredicted RBP13.78□□□□□ -0.2
HCFC2-202ENST00000544223 NUDCD3Q8IVD9 361 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 C10orf107Q8IVU9 208 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 AGR3Q8TD06 166 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 SORCS1Q8WY21 1168 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 SGF29Q96ES7 293 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 LBHD1Q9BQE6 289 aaPredicted RBP13.78□□□□□ -0.2
HCFC2-202ENST00000544223 VPS45Q9NRW7 570 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
HCFC2-202ENST00000544223 STOML2Q9UJZ1 356 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 RAI2Q9Y5P3 530 aa13.78□□□□□ -0.2
HCFC2-202ENST00000544223 TK2O00142 265 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 HLA-FP30511 346 aa13.77□□□□□ -0.21
HCFC2-202ENST00000544223 FASTKD1Q53R41 847 aaKnown RBP13.77□□□□□ -0.21
HCFC2-202ENST00000544223 CHST9Q7L1S5 443 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms