RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 MAP7D1Q3KQU3 841 aa13.03□□□□□ -0.32
DDX11-223ENST00000542838 ZNF470Q6ECI4 717 aa13.03□□□□□ -0.32
DDX11-223ENST00000542838 LIMS2Q7Z4I7 341 aa13.03□□□□□ -0.32
DDX11-223ENST00000542838 SLC25A23Q9BV35 468 aa13.03□□□□□ -0.32
DDX11-223ENST00000542838 COLEC11Q9BWP8 271 aa13.03□□□□□ -0.32
DDX11-223ENST00000542838 ANKRD60Q9BZ19 345 aa13.03□□□□□ -0.32
DDX11-223ENST00000542838 TKTL2Q9H0I9 626 aa13.03□□□□□ -0.32
DDX11-223ENST00000542838 UPF3AQ9H1J1 476 aaKnown RBP13.03□□□□□ -0.32
DDX11-223ENST00000542838 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
DDX11-223ENST00000542838 TMEM181Q9P2C4 612 aa13.03□□□□□ -0.32
DDX11-223ENST00000542838 FAF1Q9UNN5 650 aaPredicted RBP13.03□□□□□ -0.32
DDX11-223ENST00000542838 SOCS2O14508 198 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 KCNA5P22460 613 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 LRPAP1P30533 357 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 GRIA3P42263 894 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 SLC7A2P52569 658 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 PRKCQQ04759 706 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 PSMD5Q16401 504 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 PITRM1Q5JRX3 1037 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 ARHGAP36Q6ZRI8 547 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 OR9I1Q8NGQ6 314 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 HM13Q8TCT9 377 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 MIPOL1Q8TD10 442 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 CANT1Q8WVQ1 401 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 EDEM1Q92611 657 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 PHF21BQ96EK2 531 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 HSPBAP1Q96EW2 488 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 SLC39A3Q9BRY0 314 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 IGSF5Q9NSI5 407 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.32
DDX11-223ENST00000542838 RRN3Q9NYV6 651 aa13.02□□□□□ -0.32
DDX11-223ENST00000542838 GMPR2Q9P2T1 348 aaKnown RBP13.02□□□□□ -0.32
DDX11-223ENST00000542838 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 MYLKQ15746 1914 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 SAC3D1A6NKF1 404 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 A8MT66 165 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 MAGEB3O15480 346 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 HSPA8P11142 646 aaKnown RBP13.02□□□□□ -0.33
DDX11-223ENST00000542838 RPL10P27635 214 aaKnown RBP13.02□□□□□ -0.33
DDX11-223ENST00000542838 PLOD1Q02809 727 aaPredicted RBP13.02□□□□□ -0.33
DDX11-223ENST00000542838 FAM83EQ2M2I3 478 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 TECRLQ5HYJ1 363 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 NHSL2Q5HYW2 709 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 RBM20Q5T481 1227 aaKnown RBP13.02□□□□□ -0.33
DDX11-223ENST00000542838 FAM219BQ5XKK7 198 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 WSCD1Q658N2 575 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 FAM45BPQ6NSW5 357 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 PPP4R4Q6NUP7 873 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 GPRIN1Q7Z2K8 1008 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 FAM45AQ8TCE6 357 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 TRPC4APQ8TEL6 797 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 PPP1R13LQ8WUF5 828 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 DPF3Q92784 378 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 MROH8Q9H579 483 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 GPRC5DQ9NZD1 345 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 FBXO5Q9UKT4 447 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 TCAF1Q9Y4C2 921 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 IPO13O94829 963 aaKnown RBP13.02□□□□□ -0.33
DDX11-223ENST00000542838 BMP10O95393 424 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 CPB1P15086 417 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 POU4F1Q01851 419 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 SEPT6Q14141 434 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 BTBD8Q5XKL5 378 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 KLHL35Q6PF15 583 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 FAM43BQ6ZT52 329 aaPredicted RBP13.02□□□□□ -0.33
DDX11-223ENST00000542838 KDELC2Q7Z4H8 507 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 GPR141Q7Z602 305 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 TOP6BLQ8N6T0 577 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 ANKFN1Q8N957 763 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 C2CD4AQ8NCU7 369 aaPredicted RBP13.02□□□□□ -0.33
DDX11-223ENST00000542838 FAM110BQ8TC76 370 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 TCF12Q99081 682 aa13.02□□□□□ -0.33
DDX11-223ENST00000542838 PIN4Q9Y237 131 aaKnown RBP13.02□□□□□ -0.33
DDX11-223ENST00000542838 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.01□□□□□ -0.33
DDX11-223ENST00000542838 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
DDX11-223ENST00000542838 AURKAO14965 403 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 GPR32O75388 356 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 CAPN15O75808 1086 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 PAMP19021 973 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 YWHAQP27348 245 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 BAG6P46379 1132 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 STT3AP46977 705 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 PFKPQ01813 784 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 PPIL2Q13356 520 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 KIAA0319Q5VV43 1072 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 DENND5AQ6IQ26 1287 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 RWDD4Q6NW29 188 aaKnown RBP13.01□□□□□ -0.33
DDX11-223ENST00000542838 CLVS1Q8IUQ0 354 aaPredicted RBP13.01□□□□□ -0.33
DDX11-223ENST00000542838 OR2T34Q8NGX1 318 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 OR2T3Q8NH03 318 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 RNF34Q969K3 372 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 CCDC126Q96EE4 140 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 BIRC8Q96P09 236 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 TSGA13Q96PP4 275 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 ARHGEF38Q9NXL2 777 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 ATP6AP2A0A1C7CYW4 349 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 CACNG3O60359 315 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 ATP6AP2O75787 350 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 ANXA9O76027 345 aa13.01□□□□□ -0.33
DDX11-223ENST00000542838 ESRRGP62508 458 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms