RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 SPO11Q9Y5K1 396 aa17.39■□□□□ 0.38
TMEM50B-210ENST00000542230 ZMPSTE24O75844 475 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 PRLP01236 227 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 CSKP41240 450 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 CSRP3P50461 194 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 CSE1LP55060 971 aaKnown RBP17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 C1QTNF8P60827 252 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 MTA1Q13330 715 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 THOC5Q13769 683 aaKnown RBP17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 CHST9Q7L1S5 443 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 C7orf61Q8IZ16 206 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 APCDD1Q8J025 514 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 OR6P1Q8NGX9 317 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 DNAJC1Q96KC8 554 aaKnown RBP17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 TBATAQ96M53 351 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 SEPT3Q9UH03 358 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 SLC12A4Q9UP95 1085 aa17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 FCF1Q9Y324 198 aaKnown RBP17.39■□□□□ 0.37
TMEM50B-210ENST00000542230 TIMM44O43615 452 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 SERPINF2P08697 491 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 DLDP09622 509 aaKnown RBP17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 SLC35E2BP0CK96 405 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 CR2P20023 1033 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 OCRLQ01968 901 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 PPIGQ13427 754 aaKnown RBP eCLIP17.38■□□□□ 0.379e-7■■■□□ 18.9
TMEM50B-210ENST00000542230 PABPC1LQ4VXU2 614 aaKnown RBP17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 ALG1LQ6GMV1 187 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 RAPH1Q70E73 1250 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 SETD3Q86TU7 594 aaPredicted RBP17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 GPATCH11Q8N954 259 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 C2CD4AQ8NCU7 369 aaPredicted RBP17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 PTCD2Q8WV60 388 aaKnown RBP17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 POF1BQ8WVV4 589 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 MRPS31Q92665 395 aaKnown RBP17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 ERP27Q96DN0 273 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 ZNF599Q96NL3 588 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 OR51B4Q9Y5P0 310 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 GRXCR1A8MXD5 290 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 TMCC1O94876 653 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 SLC4A1P02730 911 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 DLG1Q12959 904 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 CAMK1Q14012 370 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 ATXN7L2Q5T6C5 722 aaPredicted RBP17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 NLRP9Q7RTR0 991 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 OR6K2Q8NGY2 324 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 KCTD4Q8WVF5 259 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 RAD9AQ99638 391 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 C1QTNF1Q9BXJ1 281 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 PRKAG2Q9UGJ0 569 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 VPS28Q9UK41 221 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 DENND4CQ5VZ89 1909 aa17.38■□□□□ 0.37
TMEM50B-210ENST00000542230 FAM95CA0A1B0GW59 222 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 KLF11O14901 512 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 SNNO75324 88 aaPredicted RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 ADH1AP07327 375 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 SLC8A1P32418 973 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 BMPR1AP36894 532 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 TAS2R39P59534 338 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 ZNF697Q5TEC3 545 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 FAM109BQ6ICB4 259 aaPredicted RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 NAPRTQ6XQN6 538 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 MTDHQ86UE4 582 aaKnown RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 CENPLQ8N0S6 344 aaPredicted RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 TMEM151AQ8N4L1 468 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 MRPL43Q8N983 215 aaKnown RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 DDI1Q8WTU0 396 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 ALG14Q96F25 216 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 FEM1CQ96JP0 617 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 COPG2Q9UBF2 871 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 HCFC2Q9Y5Z7 792 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 USH1CQ9Y6N9 552 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 G3V2L1 256 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 TK2O00142 265 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 INSIG1O15503 277 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 SMAD6O43541 496 aaKnown RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 FSBPO95073 299 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 SBK3P0C264 359 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 HSPA1AP0DMV8 641 aaKnown RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 HSPA1BP0DMV9 641 aaKnown RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 FYB2Q5VWT5 728 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 ARID3BQ8IVW6 561 aaPredicted RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 SPPL3Q8TCT6 385 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 MICAL1Q8TDZ2 1067 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 PDCD6IPQ8WUM4 868 aaKnown RBP17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 OLFM1Q99784 485 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 PRKD2Q9BZL6 878 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 VPS51Q9UID3 782 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 SLC4A7Q9Y6M7 1214 aa17.37■□□□□ 0.37
TMEM50B-210ENST00000542230 BIRC5O15392 142 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 SIN3BO75182 1162 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 LUC7L3O95232 432 aaKnown RBP17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 GLUD1P00367 558 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 NTHL1P78549 312 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 ITGA9Q13797 1035 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 SEMA3AQ14563 771 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 FBXW10Q5XX13 1052 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 ELMO2Q96JJ3 720 aa17.36■□□□□ 0.37
TMEM50B-210ENST00000542230 RANBP9Q96S59 729 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms