RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.77	□□□□□ -0.21
POLE-215	ENST00000540987	CNDP2	Q96KP4	475 aa	Known RBP	13.77	□□□□□ -0.21
POLE-215	ENST00000540987	LENG8	Q96PV6	779 aa	Predicted RBP	13.77	□□□□□ -0.21
POLE-215	ENST00000540987	TUBGCP5	Q96RT8	1024 aa		13.77	□□□□□ -0.21
POLE-215	ENST00000540987	SUV39H2	Q9H5I1	410 aa		13.77	□□□□□ -0.21
POLE-215	ENST00000540987	PCDH12	Q9NPG4	1184 aa		13.77	□□□□□ -0.21
POLE-215	ENST00000540987	UCKL1	Q9NWZ5	548 aa		13.77	□□□□□ -0.21
POLE-215	ENST00000540987	HS3ST3A1	Q9Y663	406 aa		13.77	□□□□□ -0.21
POLE-215	ENST00000540987	TTC24	A2A3L6	582 aa	Predicted RBP	13.76	□□□□□ -0.21
POLE-215	ENST00000540987	TMEM110-MUSTN1	A8MSY1	372 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	TRIM38	O00635	465 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	MAFK	O60675	156 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	PIAS2	O75928	621 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	PROS1	P07225	676 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	GIMD1	P0DJR0	217 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	ACADVL	P49748	655 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	PFN3	P60673	137 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	SGCG	Q13326	291 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	CCDC157	Q569K6	752 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	ZNF542P	Q5EBM4	170 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	NCBP2-AS2	Q69YL0	99 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	MARCH9	Q86YJ5	346 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	SLC25A45	Q8N413	288 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	ATPAF2	Q8N5M1	289 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.76	□□□□□ -0.21
POLE-215	ENST00000540987	HCAR2	Q8TDS4	363 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	CXorf40A	Q8TE69	158 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	CENPT	Q96BT3	561 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	ECHDC3	Q96DC8	303 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	ZNF641	Q96N77	438 aa	Predicted RBP	13.76	□□□□□ -0.21
POLE-215	ENST00000540987	ZNF599	Q96NL3	588 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	PSKH2	Q96QS6	385 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	DEF6	Q9H4E7	631 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.76	□□□□□ -0.21
POLE-215	ENST00000540987	MBNL1	Q9NR56	388 aa	Known RBP	13.76	□□□□□ -0.21
POLE-215	ENST00000540987	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.76	□□□□□ -0.21
POLE-215	ENST00000540987	SEPT3	Q9UH03	358 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	COQ6	Q9Y2Z9	468 aa		13.76	□□□□□ -0.21
POLE-215	ENST00000540987	LRP4	O75096	1905 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	TRAFD1	O14545	582 aa	Predicted RBP	13.75	□□□□□ -0.21
POLE-215	ENST00000540987	RIOK3	O14730	519 aa	Known RBP	13.75	□□□□□ -0.21
POLE-215	ENST00000540987	FPGT	O14772	594 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	AKR1B10	O60218	316 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	LDOC1	O95751	146 aa	Predicted RBP	13.75	□□□□□ -0.21
POLE-215	ENST00000540987	C6	P13671	934 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	CR2	P20023	1033 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	XPA	P23025	273 aa	Predicted RBP	13.75	□□□□□ -0.21
POLE-215	ENST00000540987	DGKA	P23743	735 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	SERPINA4	P29622	427 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	MAN1A1	P33908	653 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	SERPINB6	P35237	376 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	RABIF	P47224	123 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	CLDN6	P56747	220 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	AP1S1	P61966	158 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	ELP6	Q0PNE2	266 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	RALGDS	Q12967	914 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	ZNF235	Q14590	738 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	GRM3	Q14832	879 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	IRF4	Q15306	451 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	HADH	Q16836	314 aa	Known RBP	13.75	□□□□□ -0.21
POLE-215	ENST00000540987	UGP2	Q16851	508 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	PROX2	Q3B8N5	592 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	BRAT1	Q6PJG6	821 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	PCDH19	Q8TAB3	1148 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	FAM174A	Q8TBP5	190 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	FAF2	Q96CS3	445 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	ZNF670	Q9BS34	389 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	ATP13A3	Q9H7F0	1226 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.75	□□□□□ -0.21
POLE-215	ENST00000540987	KLF15	Q9UIH9	416 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.75	□□□□□ -0.21
POLE-215	ENST00000540987	ATP8A1	Q9Y2Q0	1164 aa		13.75	□□□□□ -0.21
POLE-215	ENST00000540987	TDRD6	O60522	2096 aa	Known RBP	13.75	□□□□□ -0.21
POLE-215	ENST00000540987	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	FFAR2	O15552	330 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	SIGLEC6	O43699	453 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	TM7SF2	O76062	418 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	MAP3K6	O95382	1288 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	TPM1	P09493	284 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	NME1	P15531	152 aa	Known RBP	13.74	□□□□□ -0.21
POLE-215	ENST00000540987	SCNN1B	P51168	640 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	SUOX	P51687	545 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	BCL2L1	Q07817	233 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
POLE-215	ENST00000540987	EIF2B5	Q13144	721 aa	Known RBP	13.74	□□□□□ -0.21
POLE-215	ENST00000540987	PDE1C	Q14123	709 aa	Predicted RBP	13.74	□□□□□ -0.21
POLE-215	ENST00000540987	PAFAH1B3	Q15102	231 aa	Known RBP	13.74	□□□□□ -0.21
POLE-215	ENST00000540987	DHRS13	Q6UX07	377 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.74	□□□□□ -0.21
POLE-215	ENST00000540987	TMPRSS7	Q7RTY8	843 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	PARG	Q86W56	976 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	DCP2	Q8IU60	420 aa	Known RBP	13.74	□□□□□ -0.21
POLE-215	ENST00000540987	CNGA4	Q8IV77	575 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	PQLC3	Q8N755	202 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	IFT43	Q96FT9	208 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	MGME1	Q9BQP7	344 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	DNAJC28	Q9NX36	388 aa		13.74	□□□□□ -0.21
POLE-215	ENST00000540987	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.73	□□□□□ -0.21
POLE-215	ENST00000540987	HTRA2	O43464	458 aa	Predicted RBP	13.73	□□□□□ -0.21
POLE-215	ENST00000540987	RFPL3	O75679	317 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms