RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 FAM208AQ9UK61 1670 aaKnown RBP11.16□□□□□ -0.62
PBX1-212ENST00000540236 SOAT2O75908 522 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 TMEM63AO94886 807 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 RPS7P62081 194 aaKnown RBP11.16□□□□□ -0.62
PBX1-212ENST00000540236 VPS72Q15906 364 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 TNFAIP8L3Q5GJ75 292 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 ZDHHC13Q8IUH4 622 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 SCML4Q8N228 414 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 ATG16L2Q8NAA4 619 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 CNIH3Q8TBE1 160 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 MYOCQ99972 504 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 POLR3BQ9NW08 1133 aaPredicted RBP11.16□□□□□ -0.62
PBX1-212ENST00000540236 GMPR2Q9P2T1 348 aaKnown RBP11.16□□□□□ -0.62
PBX1-212ENST00000540236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.16□□□□□ -0.62
PBX1-212ENST00000540236 CLUHO75153 1309 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 E9PAM4 449 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 MSH4O15457 936 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 SNRPB2P08579 225 aaKnown RBP11.16□□□□□ -0.62
PBX1-212ENST00000540236 HNRNPFP52597 415 aaKnown RBP11.16□□□□□ -0.62
PBX1-212ENST00000540236 NRG1Q02297 640 aaPredicted RBP11.16□□□□□ -0.62
PBX1-212ENST00000540236 ZC3H12BQ5HYM0 836 aaKnown RBP11.16□□□□□ -0.62
PBX1-212ENST00000540236 CDKL3Q8IVW4 592 aaPredicted RBP11.16□□□□□ -0.62
PBX1-212ENST00000540236 KATNAL2Q8IYT4 538 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 CHPT1Q8WUD6 406 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 MED30Q96HR3 178 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 MLXQ9UH92 298 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 CLEC4AQ9UMR7 237 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 IFT52Q9Y366 437 aa11.16□□□□□ -0.62
PBX1-212ENST00000540236 AREL1O15033 823 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 PDGFRAP16234 1089 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 CASP3P42574 277 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 ALDH7A1P49419 539 aaKnown RBP11.15□□□□□ -0.62
PBX1-212ENST00000540236 ZNF135P52742 658 aaPredicted RBP11.15□□□□□ -0.62
PBX1-212ENST00000540236 MFSD14BQ5SR56 506 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 CIAPIN1Q6FI81 312 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.15□□□□□ -0.62
PBX1-212ENST00000540236 DAGLBQ8NCG7 672 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 MUS81Q96NY9 551 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 CHIAQ9BZP6 476 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 MCCC2Q9HCC0 563 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 ZNF304Q9HCX3 659 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 POLG2Q9UHN1 485 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 NDUFAF1Q9Y375 327 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 ADRB2P07550 413 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 LINC00032P0C843 101 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 FDX1P10109 184 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 CRHR1P34998 444 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 KRT73Q86Y46 540 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 SLC44A2Q8IWA5 706 aaPredicted RBP11.15□□□□□ -0.62
PBX1-212ENST00000540236 CLYBLQ8N0X4 340 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 TMC2Q8TDI7 906 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 DEDD2Q8WXF8 326 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 HAS1Q92839 578 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 PCDHGC3Q9UN70 934 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 SOCS7O14512 581 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 ZBTB14O43829 449 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 COX10Q12887 443 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 ZNF699Q32M78 642 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 CHSY3Q70JA7 882 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 THAP5Q7Z6K1 395 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 TIGD4Q8IY51 512 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 SHC3Q92529 594 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 SNX15Q9NRS6 342 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.15□□□□□ -0.62
PBX1-212ENST00000540236 SNX6Q9UNH7 406 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 PSIP1O75475 530 aaKnown RBP11.15□□□□□ -0.62
PBX1-212ENST00000540236 ARHGEF15O94989 841 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 FTH1P02794 183 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 ALDH6A1Q02252 535 aaKnown RBP11.15□□□□□ -0.62
PBX1-212ENST00000540236 CEACAM7Q14002 265 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 CYP1B1Q16678 543 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 INAVAQ3KP66 663 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 ANGEL2Q5VTE6 544 aaKnown RBP11.15□□□□□ -0.62
PBX1-212ENST00000540236 LILRA2Q8N149 483 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 STX19Q8N4C7 294 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 AGBL3Q8NEM8 1001 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 NSUN4Q96CB9 384 aaKnown RBP11.15□□□□□ -0.62
PBX1-212ENST00000540236 AMNQ9BXJ7 453 aa11.15□□□□□ -0.62
PBX1-212ENST00000540236 UBA2Q9UBT2 640 aaPredicted RBP11.15□□□□□ -0.62
PBX1-212ENST00000540236 CCNE2O96020 404 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 GZMAP12544 262 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 AOC1P19801 751 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 CYP3A5P20815 502 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 TPRG1LQ5T0D9 272 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 PPP1R26Q5T8A7 1209 aaPredicted RBP11.15□□□□□ -0.63
PBX1-212ENST00000540236 VANGL1Q8TAA9 524 aaPredicted RBP11.15□□□□□ -0.63
PBX1-212ENST00000540236 FAM110BQ8TC76 370 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 SKA2Q8WVK7 121 aaPredicted RBP11.15□□□□□ -0.63
PBX1-212ENST00000540236 TPD52L3Q96J77 140 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 KREMEN1Q96MU8 473 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 ZNF347Q96SE7 839 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 AMBNQ9NP70 447 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 USP18Q9UMW8 372 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 SNX7Q9UNH6 387 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 SORCS3Q9UPU3 1222 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 PDE10AQ9Y233 779 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 VPS9D1Q9Y2B5 631 aa11.15□□□□□ -0.63
PBX1-212ENST00000540236 MROH1Q8NDA8 1641 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 hCG_1818297A0A087WSY0 165 aa11.14□□□□□ -0.63
PBX1-212ENST00000540236 XPNPEP2O43895 674 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms