RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ILF2Q12905 390 aaKnown RBP14.63□□□□□ -0.07
CACNB1-206ENST00000539338 ARMCX4Q5H9R4 360 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 MFSD5Q6N075 450 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 FAM43BQ6ZT52 329 aaPredicted RBP14.63□□□□□ -0.07
CACNB1-206ENST00000539338 NDRG1Q92597 394 aaKnown RBP14.63□□□□□ -0.07
CACNB1-206ENST00000539338 ASB8Q9H765 288 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 ADPRHL2Q9NX46 363 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 DNM1LO00429 736 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 ZBTB14O43829 449 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 HGFP14210 728 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 DGKAP23743 735 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 TKTP29401 623 aaKnown RBP14.63□□□□□ -0.07
CACNB1-206ENST00000539338 C1DQ13901 141 aaKnown RBP14.63□□□□□ -0.07
CACNB1-206ENST00000539338 PLCL1Q15111 1095 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 PTPRNQ16849 979 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 KCTD21Q4G0X4 260 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 PIWIL4Q7Z3Z4 852 aaKnown RBP14.63□□□□□ -0.07
CACNB1-206ENST00000539338 RP9Q8TA86 221 aaKnown RBP14.63□□□□□ -0.07
CACNB1-206ENST00000539338 WDR48Q8TAF3 677 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 SELENOMQ8WWX9 145 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 CPT1BQ92523 772 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 OXCT2Q9BYC2 517 aaPredicted RBP14.63□□□□□ -0.07
CACNB1-206ENST00000539338 TM6SF2Q9BZW4 377 aa14.63□□□□□ -0.07
CACNB1-206ENST00000539338 MTF2Q9Y483 593 aaPredicted RBP14.63□□□□□ -0.07
CACNB1-206ENST00000539338 DARSP14868 501 aaKnown RBP14.62□□□□□ -0.07
CACNB1-206ENST00000539338 PPP2R1BP30154 601 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 MTHFRP42898 656 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 ACSM2AQ08AH3 577 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 DGCR6Q14129 220 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 ACSM2BQ68CK6 577 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 GET4Q7L5D6 327 aaPredicted RBP14.62□□□□□ -0.07
CACNB1-206ENST00000539338 AMIGO2Q86SJ2 522 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 ECHDC2Q86YB7 292 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 NKAPQ8N5F7 415 aaKnown RBP14.62□□□□□ -0.07
CACNB1-206ENST00000539338 CDYL2Q8N8U2 506 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 SLC44A1Q8WWI5 657 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 DUSP16Q9BY84 665 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 PIK3C2AO00443 1686 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 IGLV3-22A0A075B6J6 115 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 H3BN98 237 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 TRIM38O00635 465 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 COX7A2P14406 83 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 GSTT1P30711 240 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 GBE1Q04446 702 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 GRIK3Q13003 919 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 GALNT3Q14435 633 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 DET1Q7L5Y6 550 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 STK40Q8N2I9 435 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 SETD9Q8NE22 299 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 PXYLP1Q8TE99 480 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 BRI3BPQ8WY22 251 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 BCO2Q9BYV7 579 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 ZDHHC6Q9H6R6 413 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 ZFP14Q9HCL3 533 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 KRCC1Q9NPI7 259 aaPredicted RBP14.62□□□□□ -0.07
CACNB1-206ENST00000539338 COL20A1Q9P218 1284 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 SLC27A5Q9Y2P5 690 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 TPRKBQ9Y3C4 175 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 TNPO3Q9Y5L0 923 aaKnown RBP14.62□□□□□ -0.07
CACNB1-206ENST00000539338 TRIM24O15164 1050 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 CDKN2BP42772 138 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 HOMEZQ8IX15 550 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 SVOPQ8N4V2 548 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 NACC2Q96BF6 587 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 C1orf50Q9BV19 199 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 NMUR2Q9GZQ4 415 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 CDH19Q9H159 772 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 AHSPQ9NZD4 102 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 CLUHO75153 1309 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 NTRK1P04629 796 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 CD48P09326 243 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 CDH13P55290 713 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 ALFQ53S48 1182 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 DOK6Q6PKX4 331 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 TSHZ1Q6ZSZ6 1077 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 FAM35AQ86V20 835 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 DENND1CQ8IV53 801 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 GPR152Q8TDT2 470 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 MLPHQ9BV36 600 aaPredicted RBP14.62□□□□□ -0.07
CACNB1-206ENST00000539338 WDR55Q9H6Y2 383 aaPredicted RBP14.62□□□□□ -0.07
CACNB1-206ENST00000539338 CLIC5Q9NZA1 410 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 GTF2A1LQ9UNN4 478 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 KPNA3O00505 521 aaPredicted RBP14.62□□□□□ -0.07
CACNB1-206ENST00000539338 ATP6V1C1P21283 382 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.62□□□□□ -0.07
CACNB1-206ENST00000539338 FNDC3BQ53EP0 1204 aaKnown RBP14.62□□□□□ -0.07
CACNB1-206ENST00000539338 ANKRD22Q5VYY1 191 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 C9orf57Q5W0N0 161 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 CLNKQ7Z7G1 428 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 LUZP2Q86TE4 346 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 LRRC52Q8N7C0 313 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 HDAC10Q969S8 669 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 PPP1R16AQ96I34 528 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 KLHL5Q96PQ7 755 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 CSPG4P5Q96PW8 444 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 UNC93B1Q9H1C4 597 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 ST3GAL5Q9UNP4 418 aa14.62□□□□□ -0.07
CACNB1-206ENST00000539338 PEX10O60683 326 aa14.61□□□□□ -0.07
CACNB1-206ENST00000539338 FAM13CQ8NE31 585 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms