RNA–Protein interactions for RNA: ENST00000538617.5

UBC-206, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 1,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-206ENST00000538617 HLA-DQB2P05538 268 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 PECAM1P16284 738 aaPredicted RBP18.33■□□□□ 0.53
UBC-206ENST00000538617 ZFXP17010 805 aaPredicted RBP18.33■□□□□ 0.53
UBC-206ENST00000538617 CR2P20023 1033 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 CCNCP24863 283 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 CD38P28907 300 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 RPS21P63220 83 aaKnown RBP18.33■□□□□ 0.53
UBC-206ENST00000538617 PPIDQ08752 370 aaKnown RBP18.33■□□□□ 0.53
UBC-206ENST00000538617 NSUN2Q08J23 767 aaKnown RBP eCLIP18.33■□□□□ 0.53
UBC-206ENST00000538617 AP1B1Q10567 949 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 PUM1Q14671 1186 aaKnown RBP eCLIP18.33■□□□□ 0.536e-8■□□□□ 8.2
UBC-206ENST00000538617 TMEM259Q4ZIN3 620 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 TFDP3Q5H9I0 405 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 NEK5Q6P3R8 708 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 LRRC8AQ8IWT6 810 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 RCOR2Q8IZ40 523 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 PDCD6IPQ8WUM4 868 aaKnown RBP18.33■□□□□ 0.53
UBC-206ENST00000538617 MAML1Q92585 1016 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 RBM41Q96IZ5 413 aaKnown RBP18.33■□□□□ 0.53
UBC-206ENST00000538617 FEM1CQ96JP0 617 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 CALR3Q96L12 384 aaKnown RBP18.33■□□□□ 0.53
UBC-206ENST00000538617 ZNF641Q96N77 438 aaPredicted RBP18.33■□□□□ 0.53
UBC-206ENST00000538617 HEMGNQ9BXL5 484 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 CEP41Q9BYV8 373 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 GAREM1Q9H706 876 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 PCDH12Q9NPG4 1184 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 RBM22Q9NW64 420 aaKnown RBP eCLIP18.33■□□□□ 0.531e-37■■■■■ 52.3
UBC-206ENST00000538617 SEPT10Q9P0V9 454 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 TPX2Q9ULW0 747 aaKnown RBP18.33■□□□□ 0.53
UBC-206ENST00000538617 DMTF1Q9Y222 760 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 FNDC3AQ9Y2H6 1198 aaKnown RBP18.33■□□□□ 0.53
UBC-206ENST00000538617 PCDHGC4Q9Y5F7 938 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 CAPN6Q9Y6Q1 641 aa18.33■□□□□ 0.53
UBC-206ENST00000538617 A0A1W2PR77 199 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 H0Y8X5 98 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 TSPAN6O43657 245 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 MMP20O60882 483 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 CCNB1P14635 433 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 SDHBP21912 280 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 CTNNA2P26232 953 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 CLDN2P57739 230 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 CCZ1BP86790 482 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 CCZ1P86791 482 aaPredicted RBP18.32■□□□□ 0.52
UBC-206ENST00000538617 DSC2Q02487 901 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 TRAF2Q12933 501 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 ZBTB17Q13105 803 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 HNRNPDQ14103 355 aaKnown RBP18.32■□□□□ 0.52
UBC-206ENST00000538617 TFDP2Q14188 446 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 TAZQ16635 292 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 UGP2Q16851 508 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 HLA-BQ31612 363 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 PRAMEF14Q5SWL7 426 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 NT5DC3Q86UY8 548 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 TEX26Q8N6G2 289 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 EXD1Q8NHP7 514 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 CXorf40AQ8TE69 158 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 OLFM3Q96PB7 478 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 TSGA13Q96PP4 275 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 SEMA3CQ99985 751 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 ZDHHC5Q9C0B5 715 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 GUCA1BQ9UMX6 200 aa18.32■□□□□ 0.52
UBC-206ENST00000538617 ASCC3Q8N3C0 2202 aaKnown RBP18.32■□□□□ 0.52
UBC-206ENST00000538617 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.31■□□□□ 0.52
UBC-206ENST00000538617 PRAMEF26H0Y7S4 382 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 TRAFD1O14545 582 aaPredicted RBP18.31■□□□□ 0.52
UBC-206ENST00000538617 VILLO15195 856 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 RAD51BO15315 384 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 CER1O95813 267 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 PAK4O96013 591 aaPredicted RBP18.31■□□□□ 0.52
UBC-206ENST00000538617 JCHAINP01591 159 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 HNRNPA2B1P22626 353 aaKnown RBP18.31■□□□□ 0.52
UBC-206ENST00000538617 AKT2P31751 481 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 CTSKP43235 329 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 IL9RQ01113 521 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 STAT4Q14765 748 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 PDK1Q15118 436 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 SLC45A4Q5BKX6 768 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 AADACL2Q6P093 401 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 BRAT1Q6PJG6 821 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 KDM7AQ6ZMT4 941 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 PEX26Q7Z412 305 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 ALG3Q92685 438 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 ECHDC3Q96DC8 303 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 HERPUD2Q9BSE4 406 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 SLC17A9Q9BYT1 436 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 POLR1EQ9GZS1 481 aaKnown RBP18.31■□□□□ 0.52
UBC-206ENST00000538617 AMFRQ9UKV5 643 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 ATP8A1Q9Y2Q0 1164 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 COQ6Q9Y2Z9 468 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 PCDHA3Q9Y5H8 950 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 LAMA1P25391 3075 aa18.31■□□□□ 0.52
UBC-206ENST00000538617 CCDC66A2RUB6 948 aa18.3■□□□□ 0.52
UBC-206ENST00000538617 A8MX80 341 aa18.3■□□□□ 0.52
UBC-206ENST00000538617 PPP1R12AO14974 1030 aaPredicted RBP18.3■□□□□ 0.52
UBC-206ENST00000538617 CPP00450 1065 aa18.3■□□□□ 0.52
UBC-206ENST00000538617 TGM2P21980 687 aa18.3■□□□□ 0.52
UBC-206ENST00000538617 NUDT1P36639 197 aa18.3■□□□□ 0.52
UBC-206ENST00000538617 FAM193AP78312 1265 aa18.3■□□□□ 0.52
UBC-206ENST00000538617 ELP6Q0PNE2 266 aa18.3■□□□□ 0.52
UBC-206ENST00000538617 SGCGQ13326 291 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms