RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 WDR48Q8TAF3 677 aa13.26□□□□□ -0.29
RTN3-207ENST00000536011 IFI44Q8TCB0 444 aa13.26□□□□□ -0.29
RTN3-207ENST00000536011 FNIP1Q8TF40 1166 aa13.26□□□□□ -0.29
RTN3-207ENST00000536011 SCG3Q8WXD2 468 aaKnown RBP13.26□□□□□ -0.29
RTN3-207ENST00000536011 FGF11Q92914 225 aa13.26□□□□□ -0.29
RTN3-207ENST00000536011 NAT6Q93015 286 aa13.26□□□□□ -0.29
RTN3-207ENST00000536011 EXOC2Q96KP1 924 aa13.26□□□□□ -0.29
RTN3-207ENST00000536011 WRAP53Q9BUR4 548 aaKnown RBP13.26□□□□□ -0.29
RTN3-207ENST00000536011 SUV39H2Q9H5I1 410 aa13.26□□□□□ -0.29
RTN3-207ENST00000536011 LRRC19Q9H756 370 aa13.26□□□□□ -0.29
RTN3-207ENST00000536011 SP110Q9HB58 689 aa13.26□□□□□ -0.29
RTN3-207ENST00000536011 MRPL47Q9HD33 250 aaKnown RBP13.26□□□□□ -0.29
RTN3-207ENST00000536011 LHX3Q9UBR4 397 aa13.26□□□□□ -0.29
RTN3-207ENST00000536011 MYLKQ15746 1914 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 A0A1W2PQC6 194 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 TSPAN11A1L157 253 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 TMCO5BA8MYB1 307 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 LMO7DNF2Z398 122 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 ANXA6P08133 673 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 MYBL1P10243 752 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 TIMP2P16035 220 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 IGFALSP35858 605 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 CSNK1DP48730 415 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 OGDHQ02218 1023 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 PPARDQ03181 441 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 EIF2B5Q13144 721 aaKnown RBP13.25□□□□□ -0.29
RTN3-207ENST00000536011 UGP2Q16851 508 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 KLHL40Q2TBA0 621 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 TBC1D25Q3MII6 688 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 TMEM52BQ4KMG9 183 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 PRRT3Q5FWE3 981 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 LRRC73Q5JTD7 316 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 FAXCQ5TGI0 409 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 RFX8Q6ZV50 586 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 PHACTR4Q8IZ21 702 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 FSTL5Q8N475 847 aaPredicted RBP13.25□□□□□ -0.29
RTN3-207ENST00000536011 SYT11Q9BT88 431 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 CINPQ9BW66 212 aaPredicted RBP13.25□□□□□ -0.29
RTN3-207ENST00000536011 EDEM3Q9BZQ6 932 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 KLC2Q9H0B6 622 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 PDFQ9HBH1 243 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 TAS2R14Q9NYV8 317 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 AIPL1Q9NZN9 384 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 DOLKQ9UPQ8 538 aa13.25□□□□□ -0.29
RTN3-207ENST00000536011 TDRD6O60522 2096 aaKnown RBP13.25□□□□□ -0.29
RTN3-207ENST00000536011 LY6G6EA0A0G2JKS1 128 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 TMEM191CA6NGB0 347 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 TEX33O43247 280 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 CSO75390 466 aaKnown RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 TCEA3O75764 348 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 PALMO75781 387 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 PIGNO95427 931 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 FTLP02792 175 aaPredicted RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 ALPIP09923 528 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 EIF4A3P38919 411 aaKnown RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 PRKCIP41743 596 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 PAPOLAP51003 745 aaKnown RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 RENBPP51606 427 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 POLR2LP62875 67 aaKnown RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 TPM4P67936 248 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 KLHL30Q0D2K2 578 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 IRF4Q15306 451 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 ELOCQ15369 112 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 CYTH1Q15438 398 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 CDKN3Q16667 212 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 DEFB133Q30KQ1 61 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 PPP6R3Q5H9R7 873 aaPredicted RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 C6orf132Q5T0Z8 1188 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 ESRP1Q6NXG1 681 aaKnown RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 EFL1Q7Z2Z2 1120 aaKnown RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 SDR16C5Q8N3Y7 309 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 LZTR1Q8N653 840 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 TP53I13Q8NBR0 393 aaPredicted RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 VOPP1Q96AW1 172 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 ZNF653Q96CK0 615 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 CELF6Q96J87 481 aaKnown RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 ZNF578Q96N58 590 aaPredicted RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 LRRC61Q9BV99 259 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 HAUS4Q9H6D7 363 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 ZWILCHQ9H900 591 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 PCDH12Q9NPG4 1184 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 GPATCH2LQ9NWQ4 482 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 CNOT8Q9UFF9 292 aaKnown RBP13.24□□□□□ -0.29
RTN3-207ENST00000536011 PCSK1NQ9UHG2 260 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 KLF15Q9UIH9 416 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 ATP8A1Q9Y2Q0 1164 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 U3KQA8 63 aa13.24□□□□□ -0.29
RTN3-207ENST00000536011 CPED1A4D0V7 1026 aa13.23□□□□□ -0.29
RTN3-207ENST00000536011 EME2A4GXA9 379 aaPredicted RBP13.23□□□□□ -0.29
RTN3-207ENST00000536011 CFAP69A5D8W1 941 aa13.23□□□□□ -0.29
RTN3-207ENST00000536011 J3KR12 359 aa13.23□□□□□ -0.29
RTN3-207ENST00000536011 DFFAO00273 331 aa13.23□□□□□ -0.29
RTN3-207ENST00000536011 INSIG1O15503 277 aa13.23□□□□□ -0.29
RTN3-207ENST00000536011 TLX3O43711 291 aaPredicted RBP13.23□□□□□ -0.29
RTN3-207ENST00000536011 LZTS3O60299 673 aaPredicted RBP13.23□□□□□ -0.29
RTN3-207ENST00000536011 USP12O75317 370 aa13.23□□□□□ -0.29
RTN3-207ENST00000536011 RASGRP1O95267 797 aa13.23□□□□□ -0.29
RTN3-207ENST00000536011 SERPINC1P01008 464 aa13.23□□□□□ -0.29
RTN3-207ENST00000536011 C6P13671 934 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms