RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 MRPL40Q9NQ50 206 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 VPS45Q9NRW7 570 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 MPP6Q9NZW5 540 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 MYADML2A6NDP7 307 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 TMEM233B4DJY2 109 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 ACOT8O14734 319 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 CAPNS1P04632 268 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 LTA4HP09960 611 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 PABPC4LP0CB38 370 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 HNRNPLP14866 589 aaKnown RBP eCLIP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 YY1P25490 414 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 DPP6P42658 865 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 PGFP49763 221 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 SERPINH1P50454 418 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 CLCN5P51795 746 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 PFKPQ01813 784 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 ADGRE1Q14246 886 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 ACAP2Q15057 778 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 PSMD5Q16401 504 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 TECRLQ5HYJ1 363 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 CWF19L1Q69YN2 538 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 UMODL1-AS1Q8N2C9 162 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 IMP4Q96G21 291 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 DCUN1D1Q96GG9 259 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 UBXN10Q96LJ8 280 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 UROC1Q96N76 676 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 SERPINB11Q96P15 392 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 UNKQ9C0B0 810 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 GTSE1Q9NYZ3 720 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 RAB26Q9ULW5 256 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 PADI3Q9ULW8 664 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 TXNDC9O14530 226 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 AURKAO14965 403 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 PEX11BO96011 259 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 MSX2P35548 267 aaPredicted RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 PSMD8P48556 350 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 SULT2A1Q06520 285 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 MGAT3Q09327 533 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 RBM20Q5T481 1227 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 C14orf80Q86SX3 495 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 SLC22A9Q8IVM8 553 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 BHLHE22Q8NFJ8 381 aaPredicted RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 USP13Q92995 863 aaPredicted RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 SUSD3Q96L08 255 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 MARK4Q96L34 752 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 SUDS3Q9H7L9 328 aaPredicted RBP16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 MEAF6Q9HAF1 191 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 EPS15L1Q9UBC2 864 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 RIMS3Q9UJD0 308 aa16.15■□□□□ 0.18
CHMP1A-202ENST00000535997 PTPRDP23468 1912 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 EME2A4GXA9 379 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 NEMP2A6NFY4 417 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 PENKP01210 267 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 SLC2A3P11169 496 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 TYMPP19971 482 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 CLCN2P51788 898 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 NDST2P52849 883 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 TLR1Q15399 786 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 MAPRE2Q15555 327 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 PCSK7Q16549 785 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 FBXL19Q6PCT2 694 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 CXCL17Q6UXB2 119 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 TICAM1Q8IUC6 712 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 HASPINQ8TF76 798 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 NPAS2Q99743 824 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 OLFM1Q99784 485 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 VWA7Q9Y334 891 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 TRPM7Q96QT4 1865 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 A8MT66 165 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 DNAJA2O60884 412 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 MOCS2O96007 188 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 CCDC166P0CW27 439 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 GSTT1P30711 240 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 SLC26A3P40879 764 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 MON1AQ86VX9 555 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 RNF148Q8N7C7 305 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 NCSTNQ92542 709 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 TRMOQ9BU70 441 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 TRIM4Q9C037 500 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 NOL6Q9H6R4 1146 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 NMUR1Q9HB89 426 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 NDUFA13Q9P0J0 144 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 TLR6Q9Y2C9 796 aa16.14■□□□□ 0.17
CHMP1A-202ENST00000535997 TTC3P53804 2025 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 NYNRINQ9P2P1 1898 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 PRSS51A0A1B0GVH4 220 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 STX16-NPEPL1H3BU86 382 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 TRIM38O00635 465 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 SLC7A4O43246 635 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 KCNA5P22460 613 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 CD52P31358 61 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 PTK2BQ14289 1009 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 CNPY1Q3B7I2 92 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 ZNF789Q5FWF6 425 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 MARC1Q5VT66 337 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 RNF135Q8IUD6 432 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 CILP2Q8IUL8 1156 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 ASB9Q96DX5 294 aa16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 TMA16Q96EY4 203 aaKnown RBP16.13■□□□□ 0.17
CHMP1A-202ENST00000535997 NDNQ99608 321 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms