RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TCP10L2B9ZVM9 353 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 GRM8O00222 908 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 PRYO14603 147 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 SYN3O14994 580 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 MSI1O43347 362 aaKnown RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 EPB41L2O43491 1005 aaKnown RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 ZC3H11AO75152 810 aaKnown RBP eCLIP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 MBPP02686 304 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 CPA1P15085 419 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 ATF7P17544 494 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 CD53P19397 219 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 CIITAP33076 1130 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 CYP2J2P51589 502 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 PNLIPRP1P54315 467 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 PRKAA2P54646 552 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 FOXL2P58012 376 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 ARHGAP8P85298 464 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 SLC14A1Q13336 389 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 BAK1Q16611 211 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 C5orf22Q49AR2 442 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 LRRC24Q50LG9 513 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 TMEM31Q5JXX7 168 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 PXDC1Q5TGL8 231 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 DEF8Q6ZN54 512 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 ZNF788Q6ZQV5 615 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 MRPL10Q7Z7H8 261 aaKnown RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 TMC8Q8IU68 726 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 CAMK1DQ8IU85 385 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 ZMIZ2Q8NF64 920 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 GPR150Q8NGU9 434 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 CSGALNACT1Q8TDX6 532 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 HERVK_113Q902F9 699 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 KCNJ9Q92806 393 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 TEKT1Q969V4 418 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 HVCN1Q96D96 273 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 RITA1Q96K30 269 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 C5orf34Q96MH7 638 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 TEFMQ96QE5 360 aaKnown RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 FRG2BQ96QU4 278 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 TWNKQ96RR1 684 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 AGAP2Q99490 1192 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 EFHD1Q9BUP0 239 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 MECRQ9BV79 373 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 KRTAP17-1Q9BYP8 105 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 TDRD3Q9H7E2 651 aaKnown RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 AS3MTQ9HBK9 375 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 ENTPD7Q9NQZ7 604 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 THAP1Q9NVV9 213 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 C9orf78Q9NZ63 289 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 HCN3Q9P1Z3 774 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 C11orf21Q9P2W6 132 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 ING1Q9UK53 422 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 DNAJC16Q9Y2G8 782 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 LAS1LQ9Y4W2 734 aaKnown RBP3.53□□□□□ -1.84
SNHG1-202ENST00000535689 AFG3L2Q9Y4W6 797 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 TTC28Q96AY4 2481 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 LAMA3Q16787 3333 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 VCANP13611 3396 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 AOX1Q06278 1338 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 CYP2D7A0A087X1C5 515 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 ANKRD18BA2A2Z9 1011 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 C17orf102A2RUQ5 167 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 VWA3AA6NCI4 1184 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 GAGE12JA6NER3 117 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 PEX12O00623 359 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 MTA2O94776 668 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 TMEM191BP0C7N4 346 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 CYP2D6P10635 497 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 IRF1P10914 325 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 HSPA5P11021 654 aaKnown RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 MMP13P45452 471 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 CPA2P48052 419 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 CLNS1AP54105 237 aaKnown RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 RIPK4P57078 832 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 YWHAZP63104 245 aaKnown RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 CALD1Q05682 793 aaKnown RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 PDCLQ13371 301 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 SRSF7Q16629 238 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 PLK5Q496M5 336 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 CAVIN4Q5BKX8 364 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 EARS2Q5JPH6 523 aaKnown RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 FAM171A1Q5VUB5 890 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 MFSD14CQ5VZR4 134 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 FAAH2Q6GMR7 532 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 RETSATQ6NUM9 610 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 DSTYKQ6XUX3 929 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 SYNE3Q6ZMZ3 975 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 GSTA5Q7RTV2 222 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 TRAPPC11Q7Z392 1133 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 RHPN2Q8IUC4 686 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 ARMC8Q8IUR7 673 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 SLC44A5Q8NCS7 719 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 FAM151AQ8WW52 585 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 ZKSCAN4Q969J2 545 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 PRR11Q96HE9 360 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 ADAD1Q96M93 576 aaKnown RBP3.52□□□□□ -1.85
SNHG1-202ENST00000535689 MXD3Q9BW11 206 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 SLC26A6Q9BXS9 759 aa3.52□□□□□ -1.85
SNHG1-202ENST00000535689 MTIF3Q9H2K0 278 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms