RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 CHRNB2P17787 502 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 MLLT3P42568 568 aaPredicted RBP13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 EIF3IQ13347 325 aaKnown RBP13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 RFTN1Q14699 578 aaPredicted RBP13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 ISXQ2M1V0 245 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 C6orf132Q5T0Z8 1188 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 FAM72AQ5TYM5 149 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 ACAD10Q6JQN1 1059 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 FAM72DQ6L9T8 149 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 LVRNQ6Q4G3 990 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 ENPP7Q6UWV6 458 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 FAM72BQ86X60 149 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 SPACA3Q8IXA5 215 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 NDUFAF2Q8N183 169 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 ARL10Q8N8L6 244 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 WDR36Q8NI36 951 aaKnown RBP13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 EXOC2Q96KP1 924 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 DHX35Q9H5Z1 703 aaKnown RBP13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 ZWILCHQ9H900 591 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 MRPL47Q9HD33 250 aaKnown RBP13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 FZD10Q9ULW2 581 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 PADI4Q9UM07 663 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 AP4E1Q9UPM8 1137 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 PCDHB1Q9Y5F3 818 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 ACTL7AQ9Y615 435 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 SCINQ9Y6U3 715 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 A0A1W2PQ67 120 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 TMCO5BA8MYB1 307 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 DFFAO00273 331 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 AREL1O15033 823 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 ATXN7O15265 892 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 GJB6O95452 261 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 ARL4AP40617 200 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 RHDQ02161 417 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 SERINC3Q13530 473 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 C1orf61Q13536 156 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 FGL2Q14314 439 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 ZNF235Q14590 738 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 ASIC2Q16515 512 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 UGP2Q16851 508 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 LRRC73Q5JTD7 316 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 CCDC183Q5T5S1 534 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 ERMARDQ5T6L9 678 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 TMCO4Q5TGY1 634 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 CDCP2Q5VXM1 449 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 DPY19L2P1Q6NXN4 242 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 GUSBP11Q6P575 273 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 MON1BQ7L1V2 547 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 UMODL1-AS1Q8N2C9 162 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 LZTR1Q8N653 840 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 CENPTQ96BT3 561 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 ERGIC2Q96RQ1 377 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 GPR27Q9NS67 375 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 KCTD5Q9NXV2 234 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 MOSPD1Q9UJG1 213 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 MYO6Q9UM54 1294 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 SATB2Q9UPW6 733 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 SIK3Q9Y2K2 1263 aa13.37□□□□□ -0.27
CLSTN3-205ENST00000535452 WASH4PA8MWX3 477 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 ERVH48-1M5A8F1 160 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 DXOO77932 396 aaKnown RBP13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 PCCBP05166 539 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 ELFN1P0C7U0 828 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 TSHRP16473 764 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 HK3P52790 923 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 TLE3Q04726 772 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 MTM1Q13496 603 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 NFATC4Q14934 902 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 IRF4Q15306 451 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 TMEM52BQ4KMG9 183 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 PPP6R3Q5H9R7 873 aaPredicted RBP13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 CRTC1Q6UUV9 634 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 MCOLN2Q8IZK6 566 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 RBFAQ8N0V3 343 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 PYROXD2Q8N2H3 581 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 WDR92Q96MX6 357 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 TMEM74Q96NL1 305 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 GFM1Q96RP9 751 aaKnown RBP13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 PCDHB18PQ96TA0 734 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 KLF6Q99612 283 aaPredicted RBP13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 CCDC3Q9BQI4 270 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 ANP32EQ9BTT0 268 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 LRRC61Q9BV99 259 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 BOCQ9BWV1 1114 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 EDEM3Q9BZQ6 932 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 PRORYQ9H606 182 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 LMBRD1Q9NUN5 540 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 SIRPGQ9P1W8 387 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 GGT7Q9UJ14 662 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 GPR34Q9UPC5 381 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 ATP8A1Q9Y2Q0 1164 aa13.36□□□□□ -0.27
CLSTN3-205ENST00000535452 TRPM6Q9BX84 2022 aa13.35□□□□□ -0.27
CLSTN3-205ENST00000535452 APC2O95996 2303 aa13.35□□□□□ -0.27
CLSTN3-205ENST00000535452 ATRXP46100 2492 aa13.35□□□□□ -0.27
CLSTN3-205ENST00000535452 CCDC187A0A096LP49 1063 aa13.35□□□□□ -0.27
CLSTN3-205ENST00000535452 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.35□□□□□ -0.27
CLSTN3-205ENST00000535452 CFAP69A5D8W1 941 aa13.35□□□□□ -0.27
CLSTN3-205ENST00000535452 H3BRJ5 948 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms