RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MTA2O94776 668 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 UGT2B4P06133 528 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 H2AFZP0C0S5 128 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 PAPOLAP51003 745 aaKnown RBP10.49□□□□□ -0.73
CSDE1-217ENST00000534699 THOP1P52888 689 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 BCL2L1Q07817 233 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 PAFAH1B3Q15102 231 aaKnown RBP10.49□□□□□ -0.73
CSDE1-217ENST00000534699 UGP2Q16851 508 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 ALG1LQ6GMV1 187 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 TMCO3Q6UWJ1 677 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 CYP4V2Q6ZWL3 525 aaPredicted RBP10.49□□□□□ -0.73
CSDE1-217ENST00000534699 H2AFVQ71UI9 128 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 TEX26Q8N6G2 289 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 UBE2Q2Q8WVN8 375 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 SRPK1Q96SB4 655 aaKnown RBP10.49□□□□□ -0.73
CSDE1-217ENST00000534699 ZNF670Q9BS34 389 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 BRD8Q9H0E9 1235 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 TAS2R14Q9NYV8 317 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 DGKBQ9Y6T7 804 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 LRP4O75096 1905 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 SDK1Q7Z5N4 2213 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 A0A087WV48 116 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 MYO1FO00160 1098 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 RASGRP1O95267 797 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 MAT2AP31153 395 aaKnown RBP10.49□□□□□ -0.73
CSDE1-217ENST00000534699 ACTN2P35609 894 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 MMP12P39900 470 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 LRRC14Q15048 493 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 ELOCQ15369 112 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 NR0B2Q15466 257 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 TDRD12Q587J7 1177 aaKnown RBP10.49□□□□□ -0.73
CSDE1-217ENST00000534699 ZNF765Q7L2R6 523 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 PTAR1Q7Z6K3 402 aaPredicted RBP10.49□□□□□ -0.73
CSDE1-217ENST00000534699 ARFGAP1Q8N6T3 406 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 SNIP1Q8TAD8 396 aaKnown RBP10.49□□□□□ -0.73
CSDE1-217ENST00000534699 MGME1Q9BQP7 344 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 BOCQ9BWV1 1114 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 TM6SF2Q9BZW4 377 aa10.49□□□□□ -0.73
CSDE1-217ENST00000534699 IGLON5A6NGN9 336 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 LMO7DNF2Z398 122 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 SPINT1O43278 529 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 AQP9O43315 295 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 PALMO75781 387 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 GJB6O95452 261 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 MX2P20592 715 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 DAB2P98082 770 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 FGL2Q14314 439 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 LBRQ14739 615 aaKnown RBP10.48□□□□□ -0.73
CSDE1-217ENST00000534699 NFATC4Q14934 902 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 RAB6CQ53S08 254 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 SEL1L3Q68CR1 1132 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 ALKBH5Q6P6C2 394 aaKnown RBP10.48□□□□□ -0.73
CSDE1-217ENST00000534699 PYROXD2Q8N2H3 581 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 SLC25A45Q8N413 288 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 OR8K1Q8NGG5 319 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 TMEM159Q96B96 161 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 DNAJC7Q99615 494 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 RAB6CQ9H0N0 254 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 CWC15Q9P013 229 aaKnown RBP10.48□□□□□ -0.73
CSDE1-217ENST00000534699 LRRK1Q38SD2 2015 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 RGSL1A5PLK6 1076 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 PLK4O00444 970 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 TMEM253P0C7T8 217 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 JUPP14923 745 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 ZFXP17010 805 aaPredicted RBP10.48□□□□□ -0.73
CSDE1-217ENST00000534699 CR2P20023 1033 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 BNIP3Q12983 259 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 LRRC38Q5VT99 294 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 GKN2Q86XP6 184 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 RHOT2Q8IXI1 618 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 MAML1Q92585 1016 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 FAF2Q96CS3 445 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 ZNF578Q96N58 590 aaPredicted RBP10.48□□□□□ -0.73
CSDE1-217ENST00000534699 PEBP4Q96S96 227 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 SLC13A1Q9BZW2 595 aa10.48□□□□□ -0.73
CSDE1-217ENST00000534699 SIGLEC6O43699 453 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 PAK4O96013 591 aaPredicted RBP10.47□□□□□ -0.73
CSDE1-217ENST00000534699 ANXA6P08133 673 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 ZNF30P17039 623 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 CCNCP24863 283 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 IGFALSP35858 605 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 ARSEP51690 589 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 SLC18A3Q16572 532 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 C6orf132Q5T0Z8 1188 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 ESRP1Q6NXG1 681 aaKnown RBP10.47□□□□□ -0.73
CSDE1-217ENST00000534699 PHACTR4Q8IZ21 702 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 SLC22A18ASQ8N1D0 253 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 ZNF548Q8NEK5 533 aaPredicted RBP10.47□□□□□ -0.73
CSDE1-217ENST00000534699 DPYSL5Q9BPU6 564 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 CALN1Q9BXU9 219 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 RAD18Q9NS91 495 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 CLCA2Q9UQC9 943 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 EME2A4GXA9 379 aaPredicted RBP10.47□□□□□ -0.73
CSDE1-217ENST00000534699 K7ESM1 405 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 PROSCO94903 275 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 MT-CO3P00414 261 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 GIMD1P0DJR0 217 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 SLC1A1P43005 524 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 ERVPABLB-1P60509 514 aa10.47□□□□□ -0.73
CSDE1-217ENST00000534699 SLC25A11Q02978 314 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms