RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 TAF4O00268 1085 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 DFFAO00273 331 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 SCAMP1O15126 338 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 PIGNO95427 931 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 GIMD1P0DJR0 217 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 RARAP10276 462 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 NME1P15531 152 aaKnown RBP23.51■■□□□ 1.35
YIF1A-213ENST00000534374 ITIH2P19823 946 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 PDE1CQ14123 709 aaPredicted RBP23.51■■□□□ 1.35
YIF1A-213ENST00000534374 PTK2BQ14289 1009 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 CCDC122Q5T0U0 273 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 CACTIN-AS1Q8N1I8 211 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 PDCD7Q8N8D1 485 aaKnown RBP23.51■■□□□ 1.35
YIF1A-213ENST00000534374 ZNF599Q96NL3 588 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 DUSP23Q9BVJ7 150 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 NUP85Q9BW27 656 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 ATP13A3Q9H7F0 1226 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 NLGN3Q9NZ94 848 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 CSNK1G3Q9Y6M4 447 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 TRABD2BA6NFA1 517 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 H3BM21 787 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 ALPPL2P10696 532 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 JUPP14923 745 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 TCF4P15884 667 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 CASP14P31944 242 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 HNF1BP35680 557 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 RENBPP51606 427 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 E2F1Q01094 437 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 SMTNL2Q2TAL5 461 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 LRRC73Q5JTD7 316 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 TMCO4Q5TGY1 634 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 CAMK1DQ8IU85 385 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 FAM181AQ8N9Y4 354 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 PSKH2Q96QS6 385 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 CINPQ9BW66 212 aaPredicted RBP23.5■■□□□ 1.35
YIF1A-213ENST00000534374 XPO4Q9C0E2 1151 aaKnown RBP23.5■■□□□ 1.35
YIF1A-213ENST00000534374 ANAPC7Q9UJX3 599 aa23.5■■□□□ 1.35
YIF1A-213ENST00000534374 CACNA1GO43497 2377 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 CFAP69A5D8W1 941 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 FAM149AA5PLN7 773 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 RIOK3O14730 519 aaKnown RBP23.49■■□□□ 1.35
YIF1A-213ENST00000534374 AMPD1P23109 780 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 SERPINA4P29622 427 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 RGRP47804 291 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 POLR2LP62875 67 aaKnown RBP23.49■■□□□ 1.35
YIF1A-213ENST00000534374 ZNF542PQ5EBM4 170 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 CFAP58Q5T655 872 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 ERAP2Q6P179 960 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 TMCO3Q6UWJ1 677 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 ARHGAP36Q6ZRI8 547 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 MARCH9Q86YJ5 346 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 BTN2A2Q8WVV5 523 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 RFFLQ8WZ73 363 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 HSPH1Q92598 858 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 CSPG4P5Q96PW8 444 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 PCDH12Q9NPG4 1184 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.49■■□□□ 1.35
YIF1A-213ENST00000534374 SEPT3Q9UH03 358 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 NENFQ9UMX5 172 aa23.49■■□□□ 1.35
YIF1A-213ENST00000534374 LAMA5O15230 3695 aa23.48■■□□□ 1.35
YIF1A-213ENST00000534374 CKMT1AP12532 417 aa23.48■■□□□ 1.35
YIF1A-213ENST00000534374 THOP1P52888 689 aa23.48■■□□□ 1.35
YIF1A-213ENST00000534374 SLC25A11Q02978 314 aaKnown RBP23.48■■□□□ 1.35
YIF1A-213ENST00000534374 BCL2L1Q07817 233 aa23.48■■□□□ 1.35
YIF1A-213ENST00000534374 LBRQ14739 615 aaKnown RBP23.48■■□□□ 1.35
YIF1A-213ENST00000534374 AGERQ15109 404 aa23.48■■□□□ 1.35
YIF1A-213ENST00000534374 TP53I13Q8NBR0 393 aaPredicted RBP23.48■■□□□ 1.35
YIF1A-213ENST00000534374 ECHDC3Q96DC8 303 aa23.48■■□□□ 1.35
YIF1A-213ENST00000534374 BTBD6Q96KE9 485 aa23.48■■□□□ 1.35
YIF1A-213ENST00000534374 WRAP53Q9BUR4 548 aaKnown RBP23.48■■□□□ 1.35
YIF1A-213ENST00000534374 USP29Q9HBJ7 922 aa23.48■■□□□ 1.35
YIF1A-213ENST00000534374 RCOR3Q9P2K3 495 aaPredicted RBP23.48■■□□□ 1.35
YIF1A-213ENST00000534374 KLF15Q9UIH9 416 aa23.48■■□□□ 1.35
YIF1A-213ENST00000534374 ATP8A1Q9Y2Q0 1164 aa23.48■■□□□ 1.35
YIF1A-213ENST00000534374 FFAR2O15552 330 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 CBFA2T2O43439 604 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 JUNDP17535 347 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 IGFALSP35858 605 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 PEX5P50542 639 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 AP1S1P61966 158 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 DAB2P98082 770 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 EIF2B5Q13144 721 aaKnown RBP23.47■■□□□ 1.35
YIF1A-213ENST00000534374 LRRC14Q15048 493 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 HADHQ16836 314 aaKnown RBP23.47■■□□□ 1.35
YIF1A-213ENST00000534374 TPRG1LQ5T0D9 272 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 TXNRD3NBQ6F5E7 133 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 LRRC49Q8IUZ0 686 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 TP53INP2Q8IXH6 220 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 OR8K1Q8NGG5 319 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 FAM71BQ8TC56 605 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 SPOCK2Q92563 424 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 TBATAQ96M53 351 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 PCDH18Q9HCL0 1135 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 MBNL1Q9NR56 388 aaKnown RBP23.47■■□□□ 1.35
YIF1A-213ENST00000534374 ETNK2Q9NVF9 386 aa23.47■■□□□ 1.35
YIF1A-213ENST00000534374 TMEM110-MUSTN1A8MSY1 372 aa23.46■■□□□ 1.35
YIF1A-213ENST00000534374 K7ESM1 405 aa23.46■■□□□ 1.35
YIF1A-213ENST00000534374 TPP1O14773 563 aa23.46■■□□□ 1.35
YIF1A-213ENST00000534374 SERPINB6P35237 376 aa23.46■■□□□ 1.35
YIF1A-213ENST00000534374 HSPA9P38646 679 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms