RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SLITRK4Q8IW52 837 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 SPATA20Q8TB22 786 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 ARHGEF2Q92974 986 aaKnown RBP12.58□□□□□ -0.4
CAPN1-223ENST00000533079 USP7Q93009 1102 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 NT5C3BQ969T7 300 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 HAPLN3Q96S86 360 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 RBM15Q96T37 977 aaKnown RBP eCLIP12.58□□□□□ -0.4
CAPN1-223ENST00000533079 SPON2Q9BUD6 331 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 TM6SF2Q9BZW4 377 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 INTS2Q9H0H0 1204 aaKnown RBP12.58□□□□□ -0.4
CAPN1-223ENST00000533079 MPP6Q9NZW5 540 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 ZNF212Q9UDV6 495 aa12.58□□□□□ -0.4
CAPN1-223ENST00000533079 RP1P56715 2156 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 HGSO14964 777 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-223ENST00000533079 ZW10O43264 779 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 NUDT21O43809 227 aaKnown RBP12.57□□□□□ -0.4
CAPN1-223ENST00000533079 SMC2O95347 1197 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 GNA14O95837 355 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 SCNN1AP37088 669 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 ETV5P41161 510 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 CCR10P46092 362 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 SULT1E1P49888 294 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 ZNF165P49910 485 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 MAPK10P53779 464 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 DEUP1Q05D60 604 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 PNOCQ13519 176 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 LRRC14Q15048 493 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 IRF4Q15306 451 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 MAP9Q49MG5 647 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 RYBPQ8N488 228 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-223ENST00000533079 DHTKD1Q96HY7 919 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-223ENST00000533079 PSMG3-AS1Q96PY0 264 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 CDH19Q9H159 772 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 SYNCQ9H7C4 482 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 UBE2TQ9NPD8 197 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-223ENST00000533079 ANLNQ9NQW6 1124 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 MBNL1Q9NR56 388 aaKnown RBP12.57□□□□□ -0.4
CAPN1-223ENST00000533079 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.57□□□□□ -0.4
CAPN1-223ENST00000533079 PPARGC1AQ9UBK2 798 aaKnown RBP12.57□□□□□ -0.4
CAPN1-223ENST00000533079 KLQ9UEF7 1012 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 PCDHGA3Q9Y5H0 932 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 DGKBQ9Y6T7 804 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 RNF215Q9Y6U7 377 aa12.57□□□□□ -0.4
CAPN1-223ENST00000533079 LRRK2Q5S007 2527 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 I6L893 689 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-223ENST00000533079 KRIT1O00522 736 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 CAPN5O15484 640 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-223ENST00000533079 POP4O95707 220 aaKnown RBP12.56□□□□□ -0.4
CAPN1-223ENST00000533079 ERBB2P04626 1255 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 UGT2B4P06133 528 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 MARSP56192 900 aaKnown RBP12.56□□□□□ -0.4
CAPN1-223ENST00000533079 SRP54P61011 504 aaKnown RBP12.56□□□□□ -0.4
CAPN1-223ENST00000533079 ELP6Q0PNE2 266 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 HLTFQ14527 1009 aaKnown RBP eCLIP12.56□□□□□ -0.4
CAPN1-223ENST00000533079 AGERQ15109 404 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 SKIDA1Q1XH10 827 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 SLC25A52Q3SY17 297 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 ANO6Q4KMQ2 910 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 C14orf28Q4W4Y0 310 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 C4orf17Q53FE4 359 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 PHF19Q5T6S3 580 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 OGFOD3Q6PK18 319 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 GDPD4Q6W3E5 623 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 TTC7BQ86TV6 843 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 PTRH1Q86Y79 214 aaKnown RBP12.56□□□□□ -0.4
CAPN1-223ENST00000533079 TRIM59Q8IWR1 403 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 WDTC1Q8N5D0 677 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 RNF214Q8ND24 703 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 CCDC112Q8NEF3 446 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 TSACCQ96A04 125 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-223ENST00000533079 WDR92Q96MX6 357 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 KLHL32Q96NJ5 620 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 DKK3Q9UBP4 350 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
CAPN1-223ENST00000533079 ZNF891A8MT65 544 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-223ENST00000533079 MMP20O60882 483 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 SRGAP2O75044 1071 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 CPNE6O95741 557 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 CD160O95971 181 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 TNFP01375 233 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 MAPKAPK2P49137 400 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 RAD51Q06609 339 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 MTM1Q13496 603 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 ARHGEF7Q14155 803 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 IQCB1Q15051 598 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 MYLK3Q32MK0 819 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 PTPN20Q4JDL3 420 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 EFHC2Q5JST6 749 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 ENPP7Q6UWV6 458 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 PASD1Q8IV76 773 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 Q8N9G6 341 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-223ENST00000533079 OR6K2Q8NGY2 324 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 C9orf43Q8TAL5 461 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-223ENST00000533079 KIAA1524Q8TCG1 905 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 CASKIN2Q8WXE0 1202 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 SMARCE1Q969G3 411 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 NKD1Q969G9 470 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 VOPP1Q96AW1 172 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 GDAP1L1Q96MZ0 367 aa12.55□□□□□ -0.4
CAPN1-223ENST00000533079 TAAR9Q96RI9 348 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms