RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TSGA13Q96PP4 275 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 CINPQ9BW66 212 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 CEP41Q9BYV8 373 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 POLMQ9NP87 494 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 SARDHQ9UL12 918 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 COL6A6A6NMZ7 2263 aa11.71□□□□□ -0.54
CCDC90B-210ENST00000528149 PGRMC1O00264 195 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 MUSKO15146 869 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 SH3BP5O60239 455 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 SYNCRIPO60506 623 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 ZNF821O75541 412 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 GJB3O75712 270 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 CTSLP07711 333 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 RBP3P10745 1247 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 ITPKAP23677 461 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 CCNCP24863 283 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 MAOBP27338 520 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 MMP13P45452 471 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 ABCG1P45844 678 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 RGRP47804 291 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 PSMD8P48556 350 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 SLC20A2Q08357 652 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 CYP4F3Q08477 520 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 SNX1Q13596 522 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 LBRQ14739 615 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 STARD3Q14849 445 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 E2F5Q15329 346 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 SLC45A4Q5BKX6 768 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 PEAR1Q5VY43 1037 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 LYSMD4Q5XG99 296 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 TIGD7Q6NT04 549 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 TMPRSS6Q8IU80 811 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 LRRC49Q8IUZ0 686 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 CDKL3Q8IVW4 592 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 KDM1BQ8NB78 822 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 OR6K2Q8NGY2 324 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 NSMCE1Q8WV22 266 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 MAML1Q92585 1016 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 ZNF592Q92610 1267 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 PTPRN2Q92932 1015 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 ZNF599Q96NL3 588 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 FAM129BQ96TA1 746 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 CEP44Q9C0F1 390 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 NT5MQ9NPB1 228 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 PILRBQ9UKJ0 227 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 DNPEPQ9ULA0 475 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 TTLL3Q9Y4R7 772 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 SAR1BQ9Y6B6 198 aa11.7□□□□□ -0.54
CCDC90B-210ENST00000528149 HACD1B0YJ81 288 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 CES2O00748 559 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 MATN3O15232 486 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 MID1O15344 667 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 NEBLO76041 1014 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 HLA-DQB2P05538 268 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 CCNB1P14635 433 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 ACSL1P33121 698 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 MAXP61244 160 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 IFI35P80217 286 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 XRCC4Q13426 336 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 DARS2Q6PI48 645 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 LAYNQ6UX15 382 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 BZW1Q7L1Q6 419 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 MARCH9Q86YJ5 346 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 MMAAQ8IVH4 418 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 PGBD5Q8N414 524 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 RYBPQ8N488 228 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 AADATQ8N5Z0 425 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 PCDH20Q8N6Y1 951 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 TTC13Q8NBP0 860 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 TSEN2Q8NCE0 465 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 OR2T3Q8NH03 318 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 SLC35B2Q8TB61 432 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 GRIN3AQ8TCU5 1115 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 CASKIN2Q8WXE0 1202 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 GDAP1L1Q96MZ0 367 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 AP1M1Q9BXS5 423 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 BRD8Q9H0E9 1235 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 ZDHHC6Q9H6R6 413 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 CAPN10Q9HC96 672 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 USP36Q9P275 1121 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 SEPT3Q9UH03 358 aa11.69□□□□□ -0.54
CCDC90B-210ENST00000528149 ATMQ13315 3056 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 MGAQ8IWI9 3026 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 PLXNA2O75051 1894 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 CXorf51AA0A1B0GTR3 108 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 TTC24A2A3L6 582 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 F5H423 210 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 PDE2AO00408 941 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 INSIG1O15503 277 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 KCNN4O15554 427 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 MAP3K13O43283 966 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 LIASO43766 372 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 ALDH1A2O94788 518 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 IGSF6O95976 241 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 GSRP00390 522 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 JCHAINP01591 159 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 PTPN3P26045 913 aa11.68□□□□□ -0.54
CCDC90B-210ENST00000528149 RBL1P28749 1068 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms