RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 TCRBV5S1A1TA0A578 114 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 D6RAR5 112 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 F8VZ95 297 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 KDELR3O43731 214 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 BUB1BO60566 1050 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-201ENST00000526271 POP4O95707 220 aaKnown RBP14.43□□□□□ -0.1
CPSF1-201ENST00000526271 MMP8P22894 467 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 SLC5A2P31639 672 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 UGT1A5P35504 534 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 RGRP47804 291 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 MAPKAPK2P49137 400 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 YPEL5P62699 121 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 SDR16C5Q8N3Y7 309 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 PLA2G15Q8NCC3 412 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 SLC30A5Q8TAD4 765 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 EXOC2Q96KP1 924 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 TTYH3Q9C0H2 523 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 MAGEH1Q9H213 219 aa14.43□□□□□ -0.1
CPSF1-201ENST00000526271 ATXN7L1Q9ULK2 861 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-201ENST00000526271 TSPAN11A1L157 253 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 TM7SF2O76062 418 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 LSM8O95777 96 aaKnown RBP14.42□□□□□ -0.1
CPSF1-201ENST00000526271 PRKCGP05129 697 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 ANXA6P08133 673 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 PLEKP08567 350 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-201ENST00000526271 ITIH1P19827 911 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 PTPN9P43378 593 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 ARSDP51689 593 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 HK3P52790 923 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 THOP1P52888 689 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 SNRPD1P62314 119 aaKnown RBP14.42□□□□□ -0.1
CPSF1-201ENST00000526271 ZSCAN23Q3MJ62 389 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 RWDD4Q6NW29 188 aaKnown RBP14.42□□□□□ -0.1
CPSF1-201ENST00000526271 CCDC81Q6ZN84 652 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 TTC7BQ86TV6 843 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 ZSCAN30Q86W11 494 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 GPR156Q8NFN8 814 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 TPCN2Q8NHX9 752 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 BTN2A2Q8WVV5 523 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 NAT6Q93015 286 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 HMCESQ96FZ2 354 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 PDXPQ96GD0 296 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 C11orf70Q9BRQ4 267 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 TUBGCP2Q9BSJ2 902 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 EDEM3Q9BZQ6 932 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 PDFQ9HBH1 243 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 SAMSN1Q9NSI8 373 aaKnown RBP14.42□□□□□ -0.1
CPSF1-201ENST00000526271 DKK3Q9UBP4 350 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 GULP1Q9UBP9 304 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 ACSL6Q9UKU0 697 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 MFHAS1Q9Y4C4 1052 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 OR1A2Q9Y585 309 aa14.42□□□□□ -0.1
CPSF1-201ENST00000526271 LRRK2Q5S007 2527 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 AGRPO00253 132 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 NEMP1O14524 444 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 PLD2O14939 933 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 RAMP2O60895 175 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 UNGP13051 313 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-201ENST00000526271 RFC1P35251 1148 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-201ENST00000526271 JAM2P57087 298 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 SNX16P57768 344 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 BPIFB4P59827 614 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 PPARDQ03181 441 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 ZFP36L1Q07352 338 aaKnown RBP14.41□□□□□ -0.1
CPSF1-201ENST00000526271 RALGDSQ12967 914 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 SPIDRQ14159 915 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 POLD3Q15054 466 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-201ENST00000526271 ACBD5Q5T8D3 534 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-201ENST00000526271 FAXCQ5TGI0 409 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 HID1Q8IV36 788 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 ARL10Q8N8L6 244 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 CCL4L1Q8NHW4 92 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 FAM172AQ8WUF8 416 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 HTR3CQ8WXA8 447 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 OR1E3Q8WZA6 343 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 PMEPA1Q969W9 287 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 CCNL2Q96S94 520 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-201ENST00000526271 OSBPL1AQ9BXW6 950 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 TRIM4Q9C037 500 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 CLSTN2Q9H4D0 955 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 FGF22Q9HCT0 170 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 MRPL40Q9NQ50 206 aaKnown RBP14.41□□□□□ -0.1
CPSF1-201ENST00000526271 NCKIPSDQ9NZQ3 722 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 FOXJ2Q9P0K8 574 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 PAXBP1Q9Y5B6 917 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 PCDHGA7Q9Y5G6 932 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 NBPF19A0A087WUL8 3843 aa14.41□□□□□ -0.1
CPSF1-201ENST00000526271 TMEM202A6NGA9 273 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 RASA4BC9J798 803 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 RASA4O43374 803 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 SLC28A2O43868 658 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 WISP1O95388 367 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 RPLP0P05388 317 aaKnown RBP14.4□□□□□ -0.1
CPSF1-201ENST00000526271 CCKBRP32239 447 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 MLLT3P42568 568 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-201ENST00000526271 OGDHQ02218 1023 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 PTK2BQ14289 1009 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 INPP5AQ14642 412 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 NFATC4Q14934 902 aa14.4□□□□□ -0.1
CPSF1-201ENST00000526271 WDR59Q6PJI9 974 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms