RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 APBB3O95704 486 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 CHRM5P08912 532 aaPredicted RBP4.98□□□□□ -1.61
CD44-220ENST00000525688 CYP2D6P10635 497 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 SFTPCP11686 197 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 IL4RP24394 825 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 EPHA8P29322 1005 aaPredicted RBP4.98□□□□□ -1.61
CD44-220ENST00000525688 IDUAP35475 653 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 PLA2G5P39877 138 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 ARL1P40616 181 aaPredicted RBP4.98□□□□□ -1.61
CD44-220ENST00000525688 HADHAP40939 763 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 PRPHP41219 470 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 CD151P48509 253 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 CTCFP49711 727 aaPredicted RBP4.98□□□□□ -1.61
CD44-220ENST00000525688 CDH15P55291 814 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 IRX3P78415 501 aaPredicted RBP4.98□□□□□ -1.61
CD44-220ENST00000525688 IL1RL1Q01638 556 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 PPARDQ03181 441 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 TFCP2Q12800 502 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 BYSLQ13895 437 aaKnown RBP4.98□□□□□ -1.61
CD44-220ENST00000525688 PPA1Q15181 289 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 SH2D4BQ5SQS7 431 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 IL27RAQ6UWB1 636 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 RANBP10Q6VN20 620 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 TMTC3Q6ZXV5 915 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 MDGA2Q7Z553 956 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 ADGRG6Q86SQ4 1221 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 PRPF39Q86UA1 669 aaKnown RBP4.98□□□□□ -1.61
CD44-220ENST00000525688 RPAP2Q8IXW5 612 aaPredicted RBP4.98□□□□□ -1.61
CD44-220ENST00000525688 NGEFQ8N5V2 710 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 AMER2Q8N7J2 671 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 TNIP2Q8NFZ5 429 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 SIN3AQ96ST3 1273 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 ABHD14AQ9BUJ0 271 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 TTC12Q9H892 705 aaPredicted RBP4.98□□□□□ -1.61
CD44-220ENST00000525688 SEMA4BQ9NPR2 832 aaPredicted RBP4.98□□□□□ -1.61
CD44-220ENST00000525688 HOXC10Q9NYD6 342 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 TAS2R10Q9NYW0 307 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 TBC1D14Q9P2M4 693 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 CTNNA3Q9UI47 895 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 SH3BGRL2Q9UJC5 107 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 RPS6KA6Q9UK32 745 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 DUSP12Q9UNI6 340 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 SNX8Q9Y5X2 465 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 ADGRB1O14514 1584 aa4.98□□□□□ -1.61
CD44-220ENST00000525688 KDM3AQ9Y4C1 1321 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 YTHDC2Q9H6S0 1430 aaKnown RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 ADGRL3Q9HAR2 1447 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 hCG_1807616A0A1W2PRN6 198 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 C17orf100A8MU93 164 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 UBE2Q2LH0YL09 131 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 SYN3O14994 580 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 MATN3O15232 486 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 SLC22A3O75751 556 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 GCP02774 474 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 NR2F1P10589 423 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 EEF2P13639 858 aaKnown RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 KRT13P13646 458 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 PSMA4P25789 261 aaKnown RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 GSTM2P28161 218 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 HSPA1LP34931 641 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 GGT5P36269 586 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 MTNR1AP48039 350 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 SOX2P48431 317 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 AKAP17AQ02040 695 aaKnown RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 MAP2K1Q02750 393 aaPredicted RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 MRPL28Q13084 256 aaKnown RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 ACVR2BQ13705 512 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 NAA25Q14CX7 972 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 WTAPQ15007 396 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 PFKFB3Q16875 520 aaPredicted RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 WSCD2Q2TBF2 565 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 ANKDD1AQ495B1 522 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 FAM69AQ5T7M9 428 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 VWA5B1Q5TIE3 1220 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 NAA16Q6N069 864 aaPredicted RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 AADACL2Q6P093 401 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 SERPINA13PQ6UXR4 307 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 NUP54Q7Z3B4 507 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 CHD1LQ86WJ1 897 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 CCDC170Q8IYT3 715 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 PAQR4Q8N4S7 273 aaPredicted RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 ZNF540Q8NDQ6 660 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 OR52N4Q8NGI2 321 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 FAM110DQ8TAY7 271 aaPredicted RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 UTP15Q8TED0 518 aaKnown RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 C2CD4CQ8TF44 421 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 SARAFQ96BY9 339 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 KIF1BPQ96EK5 621 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 C5orf34Q96MH7 638 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 ZNF347Q96SE7 839 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 POLR3CQ9BUI4 534 aaPredicted RBP4.97□□□□□ -1.61
CD44-220ENST00000525688 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.97□□□□□ -1.61
CD44-220ENST00000525688 PDCL3Q9H2J4 239 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 TMEM248Q9NWD8 314 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 ZDHHC7Q9NXF8 308 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 STK26Q9P289 416 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 HDAC6Q9UBN7 1215 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 SLC25A13Q9UJS0 675 aa4.97□□□□□ -1.61
CD44-220ENST00000525688 FBXL5Q9UKA1 691 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms