RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 FAM124AQ86V42 546 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 RASSF3Q86WH2 238 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 TMPRSS6Q8IU80 811 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 LRRC49Q8IUZ0 686 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 CDKL3Q8IVW4 592 aaPredicted RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 KLHDC8BQ8IXV7 354 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 AGGF1Q8N302 714 aaeCLIP6.55□□□□□ -1.36
CD44-214ENST00000525211 RYBPQ8N488 228 aaPredicted RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 ZNF557Q8N988 423 aaPredicted RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 KDM1BQ8NB78 822 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 PLPP7Q8NBV4 271 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 PRSS33Q8NF86 280 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 OR2T3Q8NH03 318 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 PIH1D2Q8WWB5 315 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 EID2BQ96D98 161 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 IMP4Q96G21 291 aaKnown RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 MRGPRX2Q96LB1 330 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 SPATA13Q96N96 652 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 KLHL32Q96NJ5 620 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 NUDCD1Q96RS6 583 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 TRIB3Q96RU7 358 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 HEPHQ9BQS7 1158 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 C1QTNF2Q9BXJ5 285 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 CEP44Q9C0F1 390 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 NEUROG2Q9H2A3 272 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 EPC1Q9H2F5 836 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 ETNK1Q9HBU6 452 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 SPATA6Q9NWH7 488 aaPredicted RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 IL36AQ9UHA7 158 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 ZNF148Q9UQR1 794 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 CHKBQ9Y259 395 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 DRG1Q9Y295 367 aaKnown RBP6.55□□□□□ -1.36
CD44-214ENST00000525211 ABCA7Q8IZY2 2146 aa6.55□□□□□ -1.36
CD44-214ENST00000525211 SDK1Q7Z5N4 2213 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 DOCK9Q9BZ29 2069 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 IGHV1OR15-9A0A0B4J2B8 117 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 C16orf96A6NNT2 1141 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 WNT9AO14904 365 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 AURKAO14965 403 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 NCAM2O15394 837 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 FZD6O60353 706 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 PMPCBO75439 489 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 BANF1O75531 89 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 GCATO75600 419 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 TMEM63AO94886 807 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 POP4O95707 220 aaKnown RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 IL1BP01584 269 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 KRT14P02533 472 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 ITGAVP06756 1048 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 ALPIP09923 528 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 ATXN1LP0C7T5 689 aaKnown RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 SP9P0CG40 484 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 CTPS1P17812 591 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 MSNP26038 577 aaKnown RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 ACSL1P33121 698 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 CA5AP35218 305 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 P2RY2P41231 377 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 CXCL12P48061 93 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 CSNK1DP48730 415 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 RENBPP51606 427 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 DGKEP52429 567 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 WNT3AP56704 352 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 SNRPD1P62314 119 aaKnown RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 PPP2CBP62714 309 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 PPP2CAP67775 309 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 ZNF33AQ06730 810 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 NSUN2Q08J23 767 aaKnown RBP eCLIP6.54□□□□□ -1.36
CD44-214ENST00000525211 GALNT3Q14435 633 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 PTPRCAPQ14761 206 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 NAA30Q147X3 362 aaPredicted RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 PCSK7Q16549 785 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 CDKN3Q16667 212 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 MAP7D1Q3KQU3 841 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 UBAP2Q5T6F2 1119 aaKnown RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 PIP5KL1Q5T9C9 394 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 AGBL4Q5VU57 503 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 TIGD7Q6NT04 549 aaPredicted RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 CCDC137Q6PK04 289 aaKnown RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 GDPD4Q6W3E5 623 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 ZNF534Q76KX8 674 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 TSPAN33Q86UF1 283 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 C1orf210Q8IVY1 113 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 PELI3Q8N2H9 469 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 SYNPOQ8N3V7 929 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 HDDC3Q8N4P3 179 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 SLC25A41Q8N5S1 370 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 PNPLA1Q8N8W4 532 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 KIF18AQ8NI77 898 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 UBE2Q2Q8WVN8 375 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 OR8D1Q8WZ84 308 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 CPT1BQ92523 772 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 KLK6Q92876 244 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 ECHDC3Q96DC8 303 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 CCDC114Q96M63 670 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 GDAP1L1Q96MZ0 367 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 FCRL5Q96RD9 977 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 TRIM56Q9BRZ2 755 aaKnown RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 LRRC1Q9BTT6 524 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 FICDQ9BVA6 458 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms