RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 TNNT1P13805 278 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 SERPINA4P29622 427 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 SERPINB6P35237 376 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 RENBPP51606 427 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 MAXP61244 160 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 BCL2L1Q07817 233 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 NSUN2Q08J23 767 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 PDK2Q15119 407 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 UGP2Q16851 508 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 INAVAQ3KP66 663 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 TMEM52BQ4KMG9 183 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 TPRG1LQ5T0D9 272 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 NCBP2-AS2Q69YL0 99 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 OXR1Q8N573 874 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 RAPGEF5Q92565 580 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 ZNF641Q96N77 438 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 LENG8Q96PV6 779 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 PSKH2Q96QS6 385 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 TUBGCP5Q96RT8 1024 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 MBNL1Q9NR56 388 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 TOR4AQ9NXH8 423 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 RCOR3Q9P2K3 495 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 FTSJ1Q9UET6 329 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 TFR2Q9UP52 801 aa12.96□□□□□ -0.33
TRAPPC4-205ENST00000525079 RIOK3O14730 519 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 YKT6O15498 198 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 TRIM16O95361 564 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 LDOC1O95751 146 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 KDELR1P24390 212 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 MAN1A1P33908 653 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 IGFALSP35858 605 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 MAGEA1P43355 309 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 ELP6Q0PNE2 266 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 DNAJC3Q13217 504 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 PAFAH1B3Q15102 231 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 MARC1Q5VT66 337 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 BRAT1Q6PJG6 821 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 KYAT3Q6YP21 454 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 KANSL1Q7Z3B3 1105 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 RAB44Q7Z6P3 723 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 MAP7D3Q8IWC1 876 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 RHOT2Q8IXI1 618 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 SLC25A45Q8N413 288 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 PQLC3Q8N755 202 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 HCAR2Q8TDS4 363 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 PDCD6IPQ8WUM4 868 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 NSMCE1Q8WV22 266 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 ASB12Q8WXK4 309 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 ADAMTS14Q8WXS8 1223 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 RFFLQ8WZ73 363 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 CENPTQ96BT3 561 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 CNDP2Q96KP4 475 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 NT5MQ9NPB1 228 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 UCKL1Q9NWZ5 548 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 DNAJC28Q9NX36 388 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 LCMT1Q9UIC8 334 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 PCDHGC4Q9Y5F7 938 aa12.95□□□□□ -0.34
TRAPPC4-205ENST00000525079 LRRD1A4D1F6 860 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 C1QTNF9BB2RNN3 333 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 ENC1O14682 589 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 LZTS3O60299 673 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 MTA2O94776 668 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 C1QTNF9P0C862 333 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 C6P13671 934 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 DGKAP23743 735 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 ARHGAP25P42331 645 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 MMP13P45452 471 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 NOP2P46087 812 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 RABIFP47224 123 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 LIG3P49916 1009 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 AP1S1P61966 158 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 GBE1Q04446 702 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 ITKQ08881 620 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 GALNT2Q10471 571 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 SLC10A2Q12908 348 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 PDE1CQ14123 709 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 FZD2Q14332 565 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 FAM182AQ5T1J6 154 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 ERAP2Q6P179 960 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 ZSCAN30Q86W11 494 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 MARCH9Q86YJ5 346 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 BBS5Q8N3I7 341 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 TP53I13Q8NBR0 393 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 NUDCD1Q96RS6 583 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 ZNF670Q9BS34 389 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 NOD2Q9HC29 1040 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 INTUQ9ULD6 942 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 ATP8A1Q9Y2Q0 1164 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 CABIN1Q9Y6J0 2220 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 LRRK1Q38SD2 2015 aa12.94□□□□□ -0.34
TRAPPC4-205ENST00000525079 TDRD6O60522 2096 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 SPTY2D1-AS1A0A0U1RR47 76 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 TRIM38O00635 465 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 TRAFD1O14545 582 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 FFAR2O15552 330 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 PIAS2O75928 621 aa12.93□□□□□ -0.34
TRAPPC4-205ENST00000525079 KRT1P04264 644 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms